Non-Coding RNA Search

Pig2-57P14

Sequence:


               
               AGATGATGACCCCTGGGCTTTGCGCACTGATTGATGCCTTTTGTAATGTCTGGGTACTTT
CATAGTCACCCTGGAAGATCACCCTGGAAGTTCATCTGGGATAAAATGATGCTGCAGCTT
GCATTCCTCAAGAGGCCNTGAAAacacacacacacacacacacacacacacacacgcacg
cacgcacgcacgcacgcacgcacTATGCATCTCTTGGTATCCTGGCTTTTATCTGTTTCT
GTGGGTATCTTTGAATTCAGGCAGAACCTATGGGAAGGACTTTTAATTGTGAATTTGTAG
GAATGAGAAGTAAATGATTTTCTGTATCGGTTTAAAATTCCCTTTCTTTTCTTCTTGTCC
AATGGGGTAAGATGACAGTGTGGCCCATATTTTTTCAGACAGACCAAAGCTTAAGTATTT
TGCTGTGTTGTCCCAATAAAAACAGTCCTAAGAGATAACTTTAGGCAAGTTATAATCAAA
TCAAGTCCATAATTTTACAATGAAATGTGCCTTCCCCGACAGAAATTCTAAAATTCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGATGATGACCCCTGGGCTTTGCGCACTGATTGATGCCTTTTGTAATGTCTGGGTACTTT
CATAGTCACCCTGGAAGATCACCCTGGAAGTTCATCTGGGATAAAATGATGCTGCAGCTT
GCATTCCTCAAGAGGCCNTGAAAacacacacacacacacacacacacacacacacgcacg
cacgcacgcacgcacgcacgcacTATGCATCTCTTGGTATCCTGGCTTTTATCTGTTTCT
GTGGGTATCTTTGAATTCAGGCAGAACCTATGGGAAGGACTTTTAATTGTGAATTTGTAG
GAATGAGAAGTAAATGATTTTCTGTATCGGTTTAAAATTCCCTTTCTTTTCTTCTTGTCC
AATGGGGTAAGATGACAGTGTGGCCCATATTTTTTCAGACAGACCAAAGCTTAAGTATTT
TGCTGTGTTGTCCCAATAAAAACAGTCCTAAGAGATAACTTTAGGCAAGTTATAATCAAA
TCAAGTCCATAATTTTACAATGAAATGTGCCTTCCCCGACAGAAATTCTAAAATTCAC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               129-235, - strand, RNAz p=0.735642

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               129-235, - strand, RNAz p=0.735642

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               54-538, gnl|bosTau2|chr3 (23846157-23845673)
               

               
               54-538, gnl|Hg17|chr1 (115913507-115914016)
               

               
               54-538, gnl|Mm7|chr3 (101984104-101983642)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               54-538, gnl|bosTau2|chr3 (23846157-23845673)
               

               
               54-538, gnl|Hg17|chr1 (115913507-115914016)
               

               
               54-538, gnl|Mm7|chr3 (101984104-101983642)

	54-538, gnl\|bosTau2\|chr3 (23846157-23845673)
	54-538, gnl\|Hg17\|chr1 (115913507-115914016)
	54-538, gnl\|Mm7\|chr3 (101984104-101983642)