Pig2-5G07
|
TTCATCCTGAGGGCCACCGCCGTCTTCATCAAAGACTTAGCCCTCTTCGACAGCGAGGAA
TCAGACCACTGCTCCAAGGGCTCGGTGGGCTGTAAGGCAGCCGTGGTTTTATTCCAGTAC
TGTGTCATGGCCAACTTCTTCTGGCTGCTGGTGGAGGGCCTCTACCTGCACACCCTACTT
GCCGTGTCCTTCTTCTCTGAGCGGAAGTACTTCTGGGGGTACATATTCGTCGGCTGGGGG
GTGCCCAGCACCTTCATCATGGTGTGGACCGTCGTCAGAATCCATTTTGAGGATTATGGA
TGCTGGGACACCATCCACTCCTCACTGTGGTGGATCATAAAGGCCCCCAGCCTCGCCTCC
ATCCTGGTGAACTTCATCCTATTCATTCGCATCATCGGAATCTTGGGTCAGAAACTGCGA
CCC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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TTCATCCTGAGGGCCACCGCCGTCTTCATCAAAGACTTAGCCCTCTTCGACAGCGAGGAA
TCAGACCACTGCTCCAAGGGCTCGGTGGGCTGTAAGGCAGCCGTGGTTTTATTCCAGTAC
TGTGTCATGGCCAACTTCTTCTGGCTGCTGGTGGAGGGCCTCTACCTGCACACCCTACTT
GCCGTGTCCTTCTTCTCTGAGCGGAAGTACTTCTGGGGGTACATATTCGTCGGCTGGGGG
GTGCCCAGCACCTTCATCATGGTGTGGACCGTCGTCAGAATCCATTTTGAGGATTATGGA
TGCTGGGACACCATCCACTCCTCACTGTGGTGGATCATAAAGGCCCCCAGCCTCGCCTCC
ATCCTGGTGAACTTCATCCTATTCATTCGCATCATCGGAATCTTGGGTCAGAAACTGCGA
CCC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
84-239, gnl|bosTau2|chr22 (7559712-7559867) |
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84-239, gnl|canFam2|chr23 (14703036-14703205) |
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84-239, gnl|danRer3|chrUn (41467093-41467263) |
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84-239, gnl|dasNov1|scaffold_71053 (3917-3750) |
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84-239, gnl|echTel1|scaffold_260124 (3688-3517) |
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84-239, gnl|fr1|chrUn (122693479-122693310) |
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84-239, gnl|galGal2|chr2 (1373686-1373856) |
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84-239, gnl|hg17|chr3 (42547262-42547432) |
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84-239, gnl|Hg17|chr3 (42547274-42547429) |
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84-239, gnl|loxAfr1|scaffold_13643 (33564-33394) |
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84-239, gnl|mm7|chr9 (121364700-121364868) |
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84-239, gnl|Mm7|chr9 (121364710-121364865) |
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84-239, gnl|monDom2|scaffold_5 (77530691-77530860) |
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84-239, gnl|oryCun1|scaffold_212685 (92962-92792) |
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84-239, gnl|panTro1|chr2 (43747009-43747179) |
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84-239, gnl|rheMac2|chr2 (94045067-94044897) |
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84-239, gnl|rn3|chrUn (57616020-57615855) |
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84-239, gnl|tetNig1|chr6 (3065050-3065210) |
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84-239, gnl|xenTro1|scaffold_1028 (294315-294478) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
84-239, gnl|bosTau2|chr22 (7559712-7559867) |
|
84-239, gnl|canFam2|chr23 (14703036-14703205) |
|
84-239, gnl|danRer3|chrUn (41467093-41467263) |
|
84-239, gnl|dasNov1|scaffold_71053 (3917-3750) |
|
84-239, gnl|echTel1|scaffold_260124 (3688-3517) |
|
84-239, gnl|fr1|chrUn (122693479-122693310) |
|
84-239, gnl|galGal2|chr2 (1373686-1373856) |
|
84-239, gnl|hg17|chr3 (42547262-42547432) |
|
84-239, gnl|Hg17|chr3 (42547274-42547429) |
|
84-239, gnl|loxAfr1|scaffold_13643 (33564-33394) |
|
84-239, gnl|mm7|chr9 (121364700-121364868) |
|
84-239, gnl|Mm7|chr9 (121364710-121364865) |
|
84-239, gnl|monDom2|scaffold_5 (77530691-77530860) |
|
84-239, gnl|oryCun1|scaffold_212685 (92962-92792) |
|
84-239, gnl|panTro1|chr2 (43747009-43747179) |
|
84-239, gnl|rheMac2|chr2 (94045067-94044897) |
|
84-239, gnl|rn3|chrUn (57616020-57615855) |
|
84-239, gnl|tetNig1|chr6 (3065050-3065210) |
|
84-239, gnl|xenTro1|scaffold_1028 (294315-294478) |
