Pig2-5K10
|
CACCTTTGAGAAGCTGGACTACCTGATGTCTAAAGAAGATAATTACAAGCGGACCCGGGA
ATATATCCGAAGCCTGAAGATGGTCCCCAGTATTCCCTATCTAGACTAGGTGAAGTGTGG
TCACAAATACGTGAGCACATTAGTGGAAAATACTTCAGCGATTGAAGCAGCCGTCCGTGA
GCTCACTCTCTGGCTGGGATCCTGGTGGCTTCGGACGTCCAGGGAGCCTTTCTGCGCACA
GTAGCGAATCCCTGAGCCAGGGTTGGAAAGACAAGCTGGGGAGTGTTTTCCTTGGCACGT
GGGCAGCCCCGGCTCTACCCAACATGAGGCAGGTTTCCGAGGCTTTCACTGGGAGAATCG
TCTTGCATTTCCTTTTGGTGACGTTAGCTGCTCTGGAAGCCCTGTATAGCATTGAGAAAT
ACGGGTATTTCGCCTGGAGATACCAGAACACAAGGCTGACCCTAACTGGGTGGCTGTGGA
ATGGGGTGCTTGGCAGCTGAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CACCTTTGAGAAGCTGGACTACCTGATGTCTAAAGAAGATAATTACAAGCGGACCCGGGA
ATATATCCGAAGCCTGAAGATGGTCCCCAGTATTCCCTATCTAGACTAGGTGAAGTGTGG
TCACAAATACGTGAGCACATTAGTGGAAAATACTTCAGCGATTGAAGCAGCCGTCCGTGA
GCTCACTCTCTGGCTGGGATCCTGGTGGCTTCGGACGTCCAGGGAGCCTTTCTGCGCACA
GTAGCGAATCCCTGAGCCAGGGTTGGAAAGACAAGCTGGGGAGTGTTTTCCTTGGCACGT
GGGCAGCCCCGGCTCTACCCAACATGAGGCAGGTTTCCGAGGCTTTCACTGGGAGAATCG
TCTTGCATTTCCTTTTGGTGACGTTAGCTGCTCTGGAAGCCCTGTATAGCATTGAGAAAT
ACGGGTATTTCGCCTGGAGATACCAGAACACAAGGCTGACCCTAACTGGGTGGCTGTGGA
ATGGGGTGCTTGGCAGCTGAG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
103-497, gnl|bosTau2|chr11 (78057052-78056649) |
|
103-497, gnl|canFam2|chr9 (59488686-59488290) |
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103-497, gnl|dasNov1|scaffold_107397 (772-367) |
|
103-497, gnl|echTel1|scaffold_313276 (209069-209480) |
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103-497, gnl|galGal2|chr17 (122775-122344) |
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103-497, gnl|hg17|chr9 (126996471-126996885) |
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103-497, gnl|Hg17|chr9 (126996566-126996970) |
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103-497, gnl|loxAfr1|scaffold_87714 (6172-6582) |
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103-497, gnl|mm7|chr2 (33192366-33191978) |
|
103-497, gnl|Mm7|chr2 (33192291-33191896) |
|
103-497, gnl|monDom2|scaffold_38 (22545828-22546258) |
|
103-497, gnl|oryCun1|scaffold_210473 (88986-89381) |
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103-497, gnl|panTro1|chr11 (111808658-111809072) |
|
103-497, gnl|rheMac2|chr15 (99431321-99430907) |
|
103-497, gnl|rn3|chr3 (12092650-12092256) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
103-497, gnl|bosTau2|chr11 (78057052-78056649) |
|
103-497, gnl|canFam2|chr9 (59488686-59488290) |
|
103-497, gnl|dasNov1|scaffold_107397 (772-367) |
|
103-497, gnl|echTel1|scaffold_313276 (209069-209480) |
|
103-497, gnl|galGal2|chr17 (122775-122344) |
|
103-497, gnl|hg17|chr9 (126996471-126996885) |
|
103-497, gnl|Hg17|chr9 (126996566-126996970) |
|
103-497, gnl|loxAfr1|scaffold_87714 (6172-6582) |
|
103-497, gnl|mm7|chr2 (33192366-33191978) |
|
103-497, gnl|Mm7|chr2 (33192291-33191896) |
|
103-497, gnl|monDom2|scaffold_38 (22545828-22546258) |
|
103-497, gnl|oryCun1|scaffold_210473 (88986-89381) |
|
103-497, gnl|panTro1|chr11 (111808658-111809072) |
|
103-497, gnl|rheMac2|chr15 (99431321-99430907) |
|
103-497, gnl|rn3|chr3 (12092650-12092256) |
