Pig2-5P16
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAGGAAAAGTTCAGGAATGGCCTTGGCCCTGTCAAAGAAGGAGAAGCTCAGTATGCTGT GGTCCATTGCACAGGCTACATCAAGGCTTGGCCTCCAGCAGGAATGACTATTCCTGAAGA AACGCTGATGTGGGACAAGGCAGCAAATATTGCCTTGTGGCAATTGGGAGACTCCAAGTG ACCAGCTCTCCTGTGTGCATGGACATGAGCGGGATGTCAGTGCCCACGGAATTCCTATCC CGGCATAACTCTGACGGGATCATCACATTTGTGGACCCAAGATGCATCAGTGTGATTGGC TACCAACCCCAGGATCTTCTAGGAAAGGACATTTTGGAGTTCTGCCACTCCGAGGATCAG AGCCATCTGCGGGAGAGCTTCCAGCAGGTGGTCAAGCTGAAAGGCCAAGTGCTGTCGGTC ATGTATCGGTTCCGAACCAAGACCGGGAGTGGGTGCTGATCCGCACCAGCAGCTTCACCT TCCAGAACCCCTACTCTGATGAGATCGAGTACATCATCTGCACCAACACCAATGTCAAGC AACTTCAGCAGCAGCAGGCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAGGAAAAGTTCAGGAATGGCCTTGGCCCTGTCAAAGAAGGAGAAGCTCAGTATGCTGT GGTCCATTGCACAGGCTACATCAAGGCTTGGCCTCCAGCAGGAATGACTATTCCTGAAGA AACGCTGATGTGGGACAAGGCAGCAAATATTGCCTTGTGGCAATTGGGAGACTCCAAGTG ACCAGCTCTCCTGTGTGCATGGACATGAGCGGGATGTCAGTGCCCACGGAATTCCTATCC CGGCATAACTCTGACGGGATCATCACATTTGTGGACCCAAGATGCATCAGTGTGATTGGC TACCAACCCCAGGATCTTCTAGGAAAGGACATTTTGGAGTTCTGCCACTCCGAGGATCAG AGCCATCTGCGGGAGAGCTTCCAGCAGGTGGTCAAGCTGAAAGGCCAAGTGCTGTCGGTC ATGTATCGGTTCCGAACCAAGACCGGGAGTGGGTGCTGATCCGCACCAGCAGCTTCACCT TCCAGAACCCCTACTCTGATGAGATCGAGTACATCATCTGCACCAACACCAATGTCAAGC AACTTCAGCAGCAGCAGGCAG |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 385-502, - strand, RNAz p=0.517494 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 385-502, - strand, RNAz p=0.517494 |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 173-313, gnl|bosTau2|chr21 (19608626-19608486) | |
| 173-313, gnl|canFam2|chr3 (59907072-59906899) | |
| 173-313, gnl|danRer3|chr16 (690638-690802) | |
| 173-313, gnl|dasNov1|scaffold_179584 (3131-3309) | |
| 173-313, gnl|echTel1|scaffold_233432 (4930-4756) | |
| 173-313, gnl|fr1|chrUn (290372719-290372566) | |
| 173-313, gnl|galGal2|chr10 (13021307-13021132) | |
| 173-313, gnl|hg17|chr15 (78632015-78632193) | |
| 173-313, gnl|Hg17|chr15 (78632031-78632175) | |
| 173-313, gnl|loxAfr1|scaffold_202947 (530-352) | |
| 173-313, gnl|mm7|chr7 (80205720-80205552) | |
| 173-313, gnl|Mm7|chr7 (80205712-80205572) | |
| 173-313, gnl|monDom2|scaffold_45 (6676053-6675875) | |
| 173-313, gnl|panTro1|chr16 (79344364-79344542) | |
| 173-313, gnl|rheMac2|chr7 (59710716-59710894) | |
| 173-313, gnl|rn3|chr1 (140654021-140653853) | |
| 173-313, gnl|tetNig1|chr8 (8685222-8685065) | |
| 173-313, gnl|xenTro1|scaffold_130 (665829-665648) | |
| 385-539, gnl|bosTau2|chr21 (19599430-19599275) | |
| 385-539, gnl|canFam2|chr3 (59898799-59898614) | |
| 385-539, gnl|danRer3|chr7 (57382542-57382363) | |
| 385-539, gnl|dasNov1|scaffold_33275 (8480-8647) | |
| 385-539, gnl|echTel1|scaffold_321696 (44186-44353) | |
| 385-539, gnl|fr1|chrUn (314262898-314262722) | |
| 385-539, gnl|galGal2|chr10 (13015121-13014936) | |
| 385-539, gnl|hg17|chr15 (78642457-78642645) | |
| 385-539, gnl|Hg17|chr15 (78642481-78642636) | |
| 385-539, gnl|loxAfr1|scaffold_90666 (5622-5809) | |
| 385-539, gnl|mm7|chr7 (80197095-80196907) | |
| 385-539, gnl|Mm7|chr7 (80197069-80196914) | |
| 385-539, gnl|monDom2|scaffold_45 (6664338-6664154) | |
| 385-539, gnl|oryCun1|scaffold_214262 (38352-38538) | |
| 385-539, gnl|panTro1|chr16 (79355022-79355210) | |
| 385-539, gnl|rheMac2|chr7 (59721157-59721345) | |
| 385-539, gnl|rn3|chr1 (140646414-140646228) | |
| 385-539, gnl|tetNig1|chr8 (8684579-8684413) | |
| 385-539, gnl|xenTro1|scaffold_130 (664080-663894) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 173-313, gnl|bosTau2|chr21 (19608626-19608486) | |
| 173-313, gnl|canFam2|chr3 (59907072-59906899) | |
| 173-313, gnl|danRer3|chr16 (690638-690802) | |
| 173-313, gnl|dasNov1|scaffold_179584 (3131-3309) | |
| 173-313, gnl|echTel1|scaffold_233432 (4930-4756) | |
| 173-313, gnl|fr1|chrUn (290372719-290372566) | |
| 173-313, gnl|galGal2|chr10 (13021307-13021132) | |
| 173-313, gnl|hg17|chr15 (78632015-78632193) | |
| 173-313, gnl|Hg17|chr15 (78632031-78632175) | |
| 173-313, gnl|loxAfr1|scaffold_202947 (530-352) | |
| 173-313, gnl|mm7|chr7 (80205720-80205552) | |
| 173-313, gnl|Mm7|chr7 (80205712-80205572) | |
| 173-313, gnl|monDom2|scaffold_45 (6676053-6675875) | |
| 173-313, gnl|panTro1|chr16 (79344364-79344542) | |
| 173-313, gnl|rheMac2|chr7 (59710716-59710894) | |
| 173-313, gnl|rn3|chr1 (140654021-140653853) | |
| 173-313, gnl|tetNig1|chr8 (8685222-8685065) | |
| 173-313, gnl|xenTro1|scaffold_130 (665829-665648) | |
| 385-539, gnl|bosTau2|chr21 (19599430-19599275) | |
| 385-539, gnl|canFam2|chr3 (59898799-59898614) | |
| 385-539, gnl|danRer3|chr7 (57382542-57382363) | |
| 385-539, gnl|dasNov1|scaffold_33275 (8480-8647) | |
| 385-539, gnl|echTel1|scaffold_321696 (44186-44353) | |
| 385-539, gnl|fr1|chrUn (314262898-314262722) | |
| 385-539, gnl|galGal2|chr10 (13015121-13014936) | |
| 385-539, gnl|hg17|chr15 (78642457-78642645) | |
| 385-539, gnl|Hg17|chr15 (78642481-78642636) | |
| 385-539, gnl|loxAfr1|scaffold_90666 (5622-5809) | |
| 385-539, gnl|mm7|chr7 (80197095-80196907) | |
| 385-539, gnl|Mm7|chr7 (80197069-80196914) | |
| 385-539, gnl|monDom2|scaffold_45 (6664338-6664154) | |
| 385-539, gnl|oryCun1|scaffold_214262 (38352-38538) | |
| 385-539, gnl|panTro1|chr16 (79355022-79355210) | |
| 385-539, gnl|rheMac2|chr7 (59721157-59721345) | |
| 385-539, gnl|rn3|chr1 (140646414-140646228) | |
| 385-539, gnl|tetNig1|chr8 (8684579-8684413) | |
| 385-539, gnl|xenTro1|scaffold_130 (664080-663894) |