Non-Coding RNA Search

Pig2-60J02

Sequence:


               
               TTCCTGGGTGCCAACCATCACAGCAGAAGATACCTTCCAGCTGCCCAGCCTTCGGGACCC
CGGCATGCCACCCATCACCAAGATCACAGTGCTGGAAGAGGAAGAGAAGAAGCCAGGGCC
CTGGGAGTCCAAGTCAGGGCCCTGGGAGTCCAATGACAGCTCAGGGACCTGCAGCCACCC
CACTCTGGTCCAGGCCTATGTGCTCCAGGGGGACCCAAGAGTACCTGCCACCCAGGCCCA
GCCCCAGTCCGGCACCAGTGACCAGGTCCTTTATGTGCAGGTGCTGGGCAGCCCCACGAG
CCCAGGGCCTGGGCACTACCTCCGCTGCGACTCCACTCAGCCCCTCTTGGGGGGCCTCAC
CCCCAGCCCCAAGTCCTATGAGAACCTCTGGTTCCAGACAAGCCCCCTGGGGACCCCAGA
ACCCTTAGTCCCAAACCCAGAGGATGATTGTATCTTTGAGCCACTGCTTGACTTCCCTCT
CCTGCAGGGGCTCCGGGTCAGTGGGGCAGAGGGGCTAGGGGGCTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCCTGGGTGCCAACCATCACAGCAGAAGATACCTTCCAGCTGCCCAGCCTTCGGGACCC
CGGCATGCCACCCATCACCAAGATCACAGTGCTGGAAGAGGAAGAGAAGAAGCCAGGGCC
CTGGGAGTCCAAGTCAGGGCCCTGGGAGTCCAATGACAGCTCAGGGACCTGCAGCCACCC
CACTCTGGTCCAGGCCTATGTGCTCCAGGGGGACCCAAGAGTACCTGCCACCCAGGCCCA
GCCCCAGTCCGGCACCAGTGACCAGGTCCTTTATGTGCAGGTGCTGGGCAGCCCCACGAG
CCCAGGGCCTGGGCACTACCTCCGCTGCGACTCCACTCAGCCCCTCTTGGGGGGCCTCAC
CCCCAGCCCCAAGTCCTATGAGAACCTCTGGTTCCAGACAAGCCCCCTGGGGACCCCAGA
ACCCTTAGTCCCAAACCCAGAGGATGATTGTATCTTTGAGCCACTGCTTGACTTCCCTCT
CCTGCAGGGGCTCCGGGTCAGTGGGGCAGAGGGGCTAGGGGGCTTC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               330-526, - strand, RNAz p=0.903942

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               330-526, - strand, RNAz p=0.903942

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               131-526, gnl|bosTau2|chr3 (76496866-76497261)
               

               
               131-526, gnl|Hg17|chr1 (36601449-36601054)
               

               
               131-526, gnl|Mm7|chr4 (125488090-125488482)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               131-526, gnl|bosTau2|chr3 (76496866-76497261)
               

               
               131-526, gnl|Hg17|chr1 (36601449-36601054)
               

               
               131-526, gnl|Mm7|chr4 (125488090-125488482)

	131-526, gnl\|bosTau2\|chr3 (76496866-76497261)
	131-526, gnl\|Hg17\|chr1 (36601449-36601054)
	131-526, gnl\|Mm7\|chr4 (125488090-125488482)