Non-Coding RNA Search

Pig2-63C07

Sequence:


               
               TTTAATTGTCTGCTTCCTGATGACGACAAAGAGACCCCATCATCGCATCAATAAGCTCTT
TCCATATAATGATGTGTGGGTCTGGCTGGCTTTATTTTCTTGAGAATGGAGCTTCTCTAG
AACACTTTTGAAGCCTGAAGCCCTCTGTTTGCAGACTTCCCATCATAGTTCTTGCCACTT
TGCTGCATCTCAGTGGGATGGAAGAACGTAAGAAATAGATAAGGCTGTGCTTACTCTGGG
AACCCAGTTATTTCCCATGTTATGAATTAATGGTTGAATGAATGAATGAATAAAAAACAA
GTGGTGAAGTTCCCTGGGTGGCTCAGCAGCCTAAAGATCCAACATTGTCACTGCTGTGGC
TCCAGTGGCAGCTATGGTGcaggttaggggtctaatcagagttgtggctgccggccttca
ccagagccacagcaacacgggatccgagccacatctgcaatctacatcacagctcacggc
aacgccggagccttaacccactgagcaaggatcaaacccgcaacctcatggttcT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAATTGTCTGCTTCCTGATGACGACAAAGAGACCCCATCATCGCATCAATAAGCTCTT
TCCATATAATGATGTGTGGGTCTGGCTGGCTTTATTTTCTTGAGAATGGAGCTTCTCTAG
AACACTTTTGAAGCCTGAAGCCCTCTGTTTGCAGACTTCCCATCATAGTTCTTGCCACTT
TGCTGCATCTCAGTGGGATGGAAGAACGTAAGAAATAGATAAGGCTGTGCTTACTCTGGG
AACCCAGTTATTTCCCATGTTATGAATTAATGGTTGAATGAATGAATGAATAAAAAACAA
GTGGTGAAGTTCCCTGGGTGGCTCAGCAGCCTAAAGATCCAACATTGTCACTGCTGTGGC
TCCAGTGGCAGCTATGGTGcaggttaggggtctaatcagagttgtggctgccggccttca
ccagagccacagcaacacgggatccgagccacatctgcaatctacatcacagctcacggc
aacgccggagccttaacccactgagcaaggatcaaacccgcaacctcatggttcT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               81-186, - strand, RNAz p=0.880953

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               81-186, - strand, RNAz p=0.880953

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-304, gnl|bosTau2|chr23 (9395583-9395873)
               

               
               1-304, gnl|Hg17|chr6 (35358520-35358885)
               

               
               1-304, gnl|Mm7|chr17 (26376899-26377193)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-304, gnl|bosTau2|chr23 (9395583-9395873)
               

               
               1-304, gnl|Hg17|chr6 (35358520-35358885)
               

               
               1-304, gnl|Mm7|chr17 (26376899-26377193)

	1-304, gnl\|bosTau2\|chr23 (9395583-9395873)
	1-304, gnl\|Hg17\|chr6 (35358520-35358885)
	1-304, gnl\|Mm7\|chr17 (26376899-26377193)