Non-Coding RNA Search

Pig2-63I18

Sequence:


               
               TAGTTAATCTGGATAAAATTAACACTTTCCTCTAAGGCAAATGTATTTTGTTCTCTCTGG
GAATATCATACATAGAAAAGAGCTATAGATGACTTGTTATAAATCCTGGCAAATTACACG
TGCATTCCGTGCATGTCTTGATCCGTACCTTCCCCTAGGTGAGCAAAAGACTCTCTGCAT
CAATTGACACAGGCATCAGTTAAAGCAGGAATTTAGATCCTCATTCACAGGATTATAAAT
CATTAAGCTTCACAGATCTGATCAACAAAAGGGGCTGGAGGAGACCTCCTCTTGCTTCAT
AGAATCTGATTGCGCCTGTTTCATATCCTCTTTCTAAGAGGATTTAAAATTTGGTTTCTA
ACATCTGTCAGAATGATTCCCCCCCTTTCTGAAGGCATTCATTAGGAAATAAAATCAGAT
ATAATTAACAAACAAACAAACCTATCTGCCTGCTGTTCTGACTTGTTTAATAAGTGTTAT
TTCTACTTACAAACAGTTTCCTGTCAGCATCCTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGTTAATCTGGATAAAATTAACACTTTCCTCTAAGGCAAATGTATTTTGTTCTCTCTGG
GAATATCATACATAGAAAAGAGCTATAGATGACTTGTTATAAATCCTGGCAAATTACACG
TGCATTCCGTGCATGTCTTGATCCGTACCTTCCCCTAGGTGAGCAAAAGACTCTCTGCAT
CAATTGACACAGGCATCAGTTAAAGCAGGAATTTAGATCCTCATTCACAGGATTATAAAT
CATTAAGCTTCACAGATCTGATCAACAAAAGGGGCTGGAGGAGACCTCCTCTTGCTTCAT
AGAATCTGATTGCGCCTGTTTCATATCCTCTTTCTAAGAGGATTTAAAATTTGGTTTCTA
ACATCTGTCAGAATGATTCCCCCCCTTTCTGAAGGCATTCATTAGGAAATAAAATCAGAT
ATAATTAACAAACAAACAAACCTATCTGCCTGCTGTTCTGACTTGTTTAATAAGTGTTAT
TTCTACTTACAAACAGTTTCCTGTCAGCATCCTGCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               275-513, - strand, RNAz p=0.833282

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               275-513, - strand, RNAz p=0.833282

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-516, gnl|bosTau2|chr11 (16809281-16809796)
               

               
               1-516, gnl|Hg17|chr2 (39673833-39674329)
               

               
               1-516, gnl|Mm7|chr17 (79116513-79116989)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-516, gnl|bosTau2|chr11 (16809281-16809796)
               

               
               1-516, gnl|Hg17|chr2 (39673833-39674329)
               

               
               1-516, gnl|Mm7|chr17 (79116513-79116989)

	1-516, gnl\|bosTau2\|chr11 (16809281-16809796)
	1-516, gnl\|Hg17\|chr2 (39673833-39674329)
	1-516, gnl\|Mm7\|chr17 (79116513-79116989)