Non-Coding RNA Search

Pig2-64E08

Sequence:


               
               TTTTCGAGCAGAACCAAGATCGCAAGCACAGAACGTACGTGTATGTACTGACTGTCACTG
AGATTCTGGAGGATTGGGAAGATTCGGTGAGCATTGGGAGGAAGCGAGAGTGGTTCAAAA
TCGAAGATGCCATCAAGGTTCTCCAGTGCCACAAACCCGTGCATGCCGAATACCTGGAAA
AACTAAAGCTGGGCGGCTCCTCAACCAATGGAAACTCCGTGGCCCCGTCCCTGCCAGAGA
GCGCTCCCTAACGAACAGCAAAGATATCCAAGATTGCTTTGAAAGAATCATTGATGTGAA
CCATTGATCAATGGAATTGTCAAGTATAGGTGAGCGCTTCCATGTTCCCAAGGAGACAGC
TCATCTGGTTTTCCTCCTACATCTTGGGACACTCCTTCCCTGTCTATTCCACTGATTCCT
TTTGGCCCAGTGGTTGTACTGTTGTACATGAACAGACTCTTATTCATCACCTGTAGCCTT
TTGCTGTGCTCTTTTGATGTGTCTGCCTTCTTCAATAGACCATGATATCCTGGAGAGCAA
GGACCATGTTTCCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTCGAGCAGAACCAAGATCGCAAGCACAGAACGTACGTGTATGTACTGACTGTCACTG
AGATTCTGGAGGATTGGGAAGATTCGGTGAGCATTGGGAGGAAGCGAGAGTGGTTCAAAA
TCGAAGATGCCATCAAGGTTCTCCAGTGCCACAAACCCGTGCATGCCGAATACCTGGAAA
AACTAAAGCTGGGCGGCTCCTCAACCAATGGAAACTCCGTGGCCCCGTCCCTGCCAGAGA
GCGCTCCCTAACGAACAGCAAAGATATCCAAGATTGCTTTGAAAGAATCATTGATGTGAA
CCATTGATCAATGGAATTGTCAAGTATAGGTGAGCGCTTCCATGTTCCCAAGGAGACAGC
TCATCTGGTTTTCCTCCTACATCTTGGGACACTCCTTCCCTGTCTATTCCACTGATTCCT
TTTGGCCCAGTGGTTGTACTGTTGTACATGAACAGACTCTTATTCATCACCTGTAGCCTT
TTGCTGTGCTCTTTTGATGTGTCTGCCTTCTTCAATAGACCATGATATCCTGGAGAGCAA
GGACCATGTTTCCTT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q8BV71_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q8BV71_MOUSE

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               10-126, + strand, RNAz p=0.929637

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               10-126, + strand, RNAz p=0.929637

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               10-241, gnl|bosTau2|chr17 (6863557-6863326)
               

               
               10-241, gnl|Hg17|chr1 (142628360-142628127)
               

               
               10-241, gnl|Mm7|chr16 (13414365-13414159)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-241, gnl|bosTau2|chr17 (6863557-6863326)
               

               
               10-241, gnl|Hg17|chr1 (142628360-142628127)
               

               
               10-241, gnl|Mm7|chr16 (13414365-13414159)

	10-241, gnl\|bosTau2\|chr17 (6863557-6863326)
	10-241, gnl\|Hg17\|chr1 (142628360-142628127)
	10-241, gnl\|Mm7\|chr16 (13414365-13414159)