Non-Coding RNA Search

Pig2-64P11

Sequence:


               
               AGAACTTCCAGCTGGCTCTCTGCTGCCACAGCTCCCCAAGGGTGGGGGGAATCAGAGGGA
GCCTTGCCGGACACTAAACCCAGAGCTGAGAGGAGAGGCAGGTGGTACAGGTGCGTCCCT
GGATCATGAGGTCATCCCTCTGCTGGCTCCTCCCACTTCTCCTCATCTTGGCCTCAGCGG
CCCAAGGCCAGCCAACAAGACGACCAAGACCCAGACCAAGGCCCCGGCCAAGACCCAGAC
CCAGGCCGACACCCAGCTTTCCTGATCCCCATGAGCCATCAGAGCCTACAGACCTGCCTC
CTCCCCTCCCACCGGGCCCGCCATCTGTCTTTCCTGACTGTCCCCGGGAGTGCTACTGCC
CCTCTGATTTCCCATCTGCCCTCTACTGTGACAGCCGCAACCTTCGAAAGGTCCCTGTCA
TCCCGTCCCGCATCCATTACCTCTATCTCCAGAACAACTTCATAACCGAGCTTCCGGTGG
AGTCCTTCAAGAATGCCACAGGCCTGAGGTGGATCAACCTGGACAACAACCGCATTCGCA
AGGTGGACCAGAGGGTGTTGGAGAAACTGCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAACTTCCAGCTGGCTCTCTGCTGCCACAGCTCCCCAAGGGTGGGGGGAATCAGAGGGA
GCCTTGCCGGACACTAAACCCAGAGCTGAGAGGAGAGGCAGGTGGTACAGGTGCGTCCCT
GGATCATGAGGTCATCCCTCTGCTGGCTCCTCCCACTTCTCCTCATCTTGGCCTCAGCGG
CCCAAGGCCAGCCAACAAGACGACCAAGACCCAGACCAAGGCCCCGGCCAAGACCCAGAC
CCAGGCCGACACCCAGCTTTCCTGATCCCCATGAGCCATCAGAGCCTACAGACCTGCCTC
CTCCCCTCCCACCGGGCCCGCCATCTGTCTTTCCTGACTGTCCCCGGGAGTGCTACTGCC
CCTCTGATTTCCCATCTGCCCTCTACTGTGACAGCCGCAACCTTCGAAAGGTCCCTGTCA
TCCCGTCCCGCATCCATTACCTCTATCTCCAGAACAACTTCATAACCGAGCTTCCGGTGG
AGTCCTTCAAGAATGCCACAGGCCTGAGGTGGATCAACCTGGACAACAACCGCATTCGCA
AGGTGGACCAGAGGGTGTTGGAGAAACTGCCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               145-258, - strand, RNAz p=0.955602

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               145-258, - strand, RNAz p=0.955602

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               168-300, - strand, RNAmicro p=0.999921

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               168-300, - strand, RNAmicro p=0.999921

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               107-572, gnl|bosTau2|chr16 (2619992-2620458)
               

               
               107-572, gnl|Hg17|chr1 (200183950-200184419)
               

               
               107-572, gnl|Mm7|chr1 (133805210-133804753)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               107-572, gnl|bosTau2|chr16 (2619992-2620458)
               

               
               107-572, gnl|Hg17|chr1 (200183950-200184419)
               

               
               107-572, gnl|Mm7|chr1 (133805210-133804753)

	107-572, gnl\|bosTau2\|chr16 (2619992-2620458)
	107-572, gnl\|Hg17\|chr1 (200183950-200184419)
	107-572, gnl\|Mm7\|chr1 (133805210-133804753)