Non-Coding RNA Search

Pig2-65A01

Sequence:


               
               GGAGGAAATCAGCATAGGGCCCTCCTTGGGGCCCAGGGGCAACAGTGAGGACTCAGCAGC
CCCAGGGAACCTGAGAGCCTGGATGGGCCAGGATTGTCCCCTGTCTCACAGCAGCAAGGC
TGCCCCTGTCCTGGCTCCTGAGTTCAGGAGCCTGGCACTAAAATACCTTCTGACCCCAGT
GAATGTTCTCCCGGCAAGGTTCTCTTCCAGGGGCTTTGACCAGCAAGTGGAAAAATACCA
TAAACTCTTGCTCAAGCACAAAAAGGAGAGTACAGAGTGACAGCCTTGTTGGATCCAATG
CTGAAGTTCAAGATAGTGACTGACAGCTTACTTGGGGCCTTACTTTTCTGTGTTGACAGG
ATCCTCATGAACTCACCCTGTAACGAGACTTCTCCAAGGGTGATCATTAGAATCCTAGTG
CCTATGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGGAAATCAGCATAGGGCCCTCCTTGGGGCCCAGGGGCAACAGTGAGGACTCAGCAGC
CCCAGGGAACCTGAGAGCCTGGATGGGCCAGGATTGTCCCCTGTCTCACAGCAGCAAGGC
TGCCCCTGTCCTGGCTCCTGAGTTCAGGAGCCTGGCACTAAAATACCTTCTGACCCCAGT
GAATGTTCTCCCGGCAAGGTTCTCTTCCAGGGGCTTTGACCAGCAAGTGGAAAAATACCA
TAAACTCTTGCTCAAGCACAAAAAGGAGAGTACAGAGTGACAGCCTTGTTGGATCCAATG
CTGAAGTTCAAGATAGTGACTGACAGCTTACTTGGGGCCTTACTTTTCTGTGTTGACAGG
ATCCTCATGAACTCACCCTGTAACGAGACTTCTCCAAGGGTGATCATTAGAATCCTAGTG
CCTATGG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               77-196, - strand, RNAz p=0.963464

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               77-196, - strand, RNAz p=0.963464

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-308, gnl|bosTau2|chr3 (24374575-24374272)
               

               
               1-308, gnl|Hg17|chr1 (114166600-114166900)
               

               
               1-308, gnl|Mm7|chr3 (103597237-103596970)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-308, gnl|bosTau2|chr3 (24374575-24374272)
               

               
               1-308, gnl|Hg17|chr1 (114166600-114166900)
               

               
               1-308, gnl|Mm7|chr3 (103597237-103596970)

	1-308, gnl\|bosTau2\|chr3 (24374575-24374272)
	1-308, gnl\|Hg17\|chr1 (114166600-114166900)
	1-308, gnl\|Mm7\|chr3 (103597237-103596970)