Non-Coding RNA Search

Pig2-65D23

Sequence:


               
               GAAGACGTTGGAGGAAATTCTGAGCCGCCTACAGGAGGAAGAGTTGGAAAGGGACAGGAA
GCTGCAACCCGCAGCCAAGGGACTCTTGGAGAAAGGACCTGGGCTGAAGCGACTGAGCTT
ACAGGACAACAAGATCCCTCCTAAGTCCCCACGCCCACGGCGTACCATCTGGCTGTCTCG
AAGCCAGTCAGACATCTTCTCCAGCAAGCCCCCACGTACAGTGAATGTCTTGGACCCCTA
CTACCAGCCACAACGAGGCGGTGCTGCCCGCGCCCCCAAAATCAACCCTTTCAGTGCTCG
CCAGGACCTCAAAGGTGGCAAGATCAAATTCTTCGACCTGCCCAGCAAATCTGTCATCTC
CCTGGTGTTTGACCTGGATGCGCCAGGGCCTGGAAGCACGCCTGTGGCCGAGTGGCAGGA
GCCCCTGGCTCCACCGGCTCGCCGGTGGCGTTCTTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGACGTTGGAGGAAATTCTGAGCCGCCTACAGGAGGAAGAGTTGGAAAGGGACAGGAA
GCTGCAACCCGCAGCCAAGGGACTCTTGGAGAAAGGACCTGGGCTGAAGCGACTGAGCTT
ACAGGACAACAAGATCCCTCCTAAGTCCCCACGCCCACGGCGTACCATCTGGCTGTCTCG
AAGCCAGTCAGACATCTTCTCCAGCAAGCCCCCACGTACAGTGAATGTCTTGGACCCCTA
CTACCAGCCACAACGAGGCGGTGCTGCCCGCGCCCCCAAAATCAACCCTTTCAGTGCTCG
CCAGGACCTCAAAGGTGGCAAGATCAAATTCTTCGACCTGCCCAGCAAATCTGTCATCTC
CCTGGTGTTTGACCTGGATGCGCCAGGGCCTGGAAGCACGCCTGTGGCCGAGTGGCAGGA
GCCCCTGGCTCCACCGGCTCGCCGGTGGCGTTCTTTG

Predicted RNA structure(s): 2 entry(ies)

More info

Predicted RNA structure(s): 2 entry(ies)

Help | Less info


               
               119-238, - strand, RNAz p=0.775454
               

               
               279-398, - strand, RNAz p=0.769713

Predicted RNA structure(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               119-238, - strand, RNAz p=0.775454
               

               
               279-398, - strand, RNAz p=0.769713

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               80-457, gnl|bosTau2|chr3 (70442816-70443193)
               

               
               80-457, gnl|Hg17|chr1 (45480324-45479950)
               

               
               80-457, gnl|Mm7|chr4 (116179035-116179409)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               80-457, gnl|bosTau2|chr3 (70442816-70443193)
               

               
               80-457, gnl|Hg17|chr1 (45480324-45479950)
               

               
               80-457, gnl|Mm7|chr4 (116179035-116179409)

	119-238, - strand, RNAz p=0.775454
	279-398, - strand, RNAz p=0.769713

	80-457, gnl\|bosTau2\|chr3 (70442816-70443193)
	80-457, gnl\|Hg17\|chr1 (45480324-45479950)
	80-457, gnl\|Mm7\|chr4 (116179035-116179409)