Pig2-66K10
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAAGCCTTTGCCATAGGGGTGGCCTTCCCTTCCCTCTAGCCTCATCTCAAACCCTACCTT TGAGGATTTGAGCCTCAAATACCATCTCCCTCCTGACGACTCAGCCTTAACCCTCATCAC CCGCTTTCACGTCTGGCCCCCATTTTCATCCTGAACTCCCATCCTCAGCCCTGAAAACTC CATTCTCCATCCCAACACTCACCCACAGATTCCACCGCAAGGGACCCTTAAACCCACACC CTCCTCCCTGTTGAGACCCAGCCCCAAACTCTCCCCCATACCTCTCCCTCACCATATATC CATTCCTCTGCTCAGCCTGGGCCCAGGTCCTGTGCCCCTGAAGACATGGAGTTTGTGTCT GGATACCGTGATGAGTTCCTTGATTTCGCTGCCCTTCTCTTTGGCTGGTTCCACAAGTTC ATGGCGGAGCGTGGGGCTGTGGGGACCAGCCCCGAGGGCCGCTGGCAGCAGCTGGAGGCT CATATCAGAAGGCTGCCCCAGGACCCTGCCCTTTGGGTGCTCCACGTCTTACCCAACCGC AGTGTGGGCATCAGCCTGGGGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAAGCCTTTGCCATAGGGGTGGCCTTCCCTTCCCTCTAGCCTCATCTCAAACCCTACCTT TGAGGATTTGAGCCTCAAATACCATCTCCCTCCTGACGACTCAGCCTTAACCCTCATCAC CCGCTTTCACGTCTGGCCCCCATTTTCATCCTGAACTCCCATCCTCAGCCCTGAAAACTC CATTCTCCATCCCAACACTCACCCACAGATTCCACCGCAAGGGACCCTTAAACCCACACC CTCCTCCCTGTTGAGACCCAGCCCCAAACTCTCCCCCATACCTCTCCCTCACCATATATC CATTCCTCTGCTCAGCCTGGGCCCAGGTCCTGTGCCCCTGAAGACATGGAGTTTGTGTCT GGATACCGTGATGAGTTCCTTGATTTCGCTGCCCTTCTCTTTGGCTGGTTCCACAAGTTC ATGGCGGAGCGTGGGGCTGTGGGGACCAGCCCCGAGGGCCGCTGGCAGCAGCTGGAGGCT CATATCAGAAGGCTGCCCCAGGACCCTGCCCTTTGGGTGCTCCACGTCTTACCCAACCGC AGTGTGGGCATCAGCCTGGGGCA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 445-563, - strand, RNAz p=0.535515 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 445-563, - strand, RNAz p=0.535515 |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 65-244, gnl|bosTau2|chr19 (14494053-14493872) | |
| 65-244, gnl|canFam2|chr5 (34813319-34812875) | |
| 65-244, gnl|hg17|chr17 (4590000-4590445) | |
| 65-244, gnl|Hg17|chr17 (4590307-4590488) | |
| 65-244, gnl|mm7|chr11 (70541626-70542004) | |
| 65-244, gnl|Mm7|chr11 (70541882-70542074) | |
| 65-244, gnl|monDom2|scaffold_66 (3646040-3645471) | |
| 65-244, gnl|oryCun1|scaffold_207866 (2413-1990) | |
| 65-244, gnl|panTro1|chr19 (4901870-4902315) | |
| 65-244, gnl|rheMac2|chr16 (4523656-4524100) | |
| 65-244, gnl|rn3|chr10 (57314705-57315130) | |
| 263-563, gnl|bosTau2|chr19 (14493883-14493587) | |
| 263-563, gnl|canFam2|chr5 (34812872-34812185) | |
| 263-563, gnl|echTel1|scaffold_292973 (8035-8701) | |
| 263-563, gnl|hg17|chr17 (4590446-4591144) | |
| 263-563, gnl|Hg17|chr17 (4590477-4590810) | |
| 263-563, gnl|mm7|chr11 (70542007-70542674) | |
| 263-563, gnl|Mm7|chr11 (70542062-70542361) | |
| 263-563, gnl|monDom2|scaffold_66 (3645470-3644760) | |
| 263-563, gnl|oryCun1|scaffold_207866 (1987-1339) | |
| 263-563, gnl|panTro1|chr19 (4902316-4903013) | |
| 263-563, gnl|rheMac2|chr16 (4524101-4524797) | |
| 263-563, gnl|rn3|chr10 (57315133-57315807) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 65-244, gnl|bosTau2|chr19 (14494053-14493872) | |
| 65-244, gnl|canFam2|chr5 (34813319-34812875) | |
| 65-244, gnl|hg17|chr17 (4590000-4590445) | |
| 65-244, gnl|Hg17|chr17 (4590307-4590488) | |
| 65-244, gnl|mm7|chr11 (70541626-70542004) | |
| 65-244, gnl|Mm7|chr11 (70541882-70542074) | |
| 65-244, gnl|monDom2|scaffold_66 (3646040-3645471) | |
| 65-244, gnl|oryCun1|scaffold_207866 (2413-1990) | |
| 65-244, gnl|panTro1|chr19 (4901870-4902315) | |
| 65-244, gnl|rheMac2|chr16 (4523656-4524100) | |
| 65-244, gnl|rn3|chr10 (57314705-57315130) | |
| 263-563, gnl|bosTau2|chr19 (14493883-14493587) | |
| 263-563, gnl|canFam2|chr5 (34812872-34812185) | |
| 263-563, gnl|echTel1|scaffold_292973 (8035-8701) | |
| 263-563, gnl|hg17|chr17 (4590446-4591144) | |
| 263-563, gnl|Hg17|chr17 (4590477-4590810) | |
| 263-563, gnl|mm7|chr11 (70542007-70542674) | |
| 263-563, gnl|Mm7|chr11 (70542062-70542361) | |
| 263-563, gnl|monDom2|scaffold_66 (3645470-3644760) | |
| 263-563, gnl|oryCun1|scaffold_207866 (1987-1339) | |
| 263-563, gnl|panTro1|chr19 (4902316-4903013) | |
| 263-563, gnl|rheMac2|chr16 (4524101-4524797) | |
| 263-563, gnl|rn3|chr10 (57315133-57315807) |