Non-Coding RNA Search

Pig2-67K12

Sequence:


               
               GGAAAATCGTAGCTCACCTTTGCACTTGCTGCATCTGTCTTTGTTTCTGCACTAATTAAT
GCACAATGAGTTTTGTCGGGTTTTGTTTTCAGGGGGTGTGCCAGGGCAAGGACCCTCTGG
CTCACCCTGCAAGCGACTCTGTAGTTTTACCACATTTTATTTTTCTCATTTTGCGGATGA
AAAGCAAAAAAGATACTACGTGTTCATGAGGTGTTGACACGAGCCTACATCTAGGGTTAT
TTATTAAAAGCGCTTTTTTACATTCCTTGCAATACTGAAGGTGATGATGTGCATGTCTCA
TTGGTTTCATTCTTGCAGTTGCCACTACAGTGTCCTTTCCATTTATTTAACCCCCACCTG
AACGGCATAAACTGAGTGTTCAGCTGGTGTTTTTTACTGTAAACAACAAGGATACTTTGC
TCTTCATTTAAACCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAAATCGTAGCTCACCTTTGCACTTGCTGCATCTGTCTTTGTTTCTGCACTAATTAAT
GCACAATGAGTTTTGTCGGGTTTTGTTTTCAGGGGGTGTGCCAGGGCAAGGACCCTCTGG
CTCACCCTGCAAGCGACTCTGTAGTTTTACCACATTTTATTTTTCTCATTTTGCGGATGA
AAAGCAAAAAAGATACTACGTGTTCATGAGGTGTTGACACGAGCCTACATCTAGGGTTAT
TTATTAAAAGCGCTTTTTTACATTCCTTGCAATACTGAAGGTGATGATGTGCATGTCTCA
TTGGTTTCATTCTTGCAGTTGCCACTACAGTGTCCTTTCCATTTATTTAACCCCCACCTG
AACGGCATAAACTGAGTGTTCAGCTGGTGTTTTTTACTGTAAACAACAAGGATACTTTGC
TCTTCATTTAAACCA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               41-195, - strand, RNAz p=0.693397

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               41-195, - strand, RNAz p=0.693397

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-435, gnl|bosTau2|chr21 (13216981-13216537)
               

               
               1-435, gnl|Hg17|chr15 (81010288-81009830)
               

               
               1-435, gnl|Mm7|chr7 (77220936-77220506)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-435, gnl|bosTau2|chr21 (13216981-13216537)
               

               
               1-435, gnl|Hg17|chr15 (81010288-81009830)
               

               
               1-435, gnl|Mm7|chr7 (77220936-77220506)

	1-435, gnl\|bosTau2\|chr21 (13216981-13216537)
	1-435, gnl\|Hg17\|chr15 (81010288-81009830)
	1-435, gnl\|Mm7\|chr7 (77220936-77220506)