Non-Coding RNA Search

Pig2-67P24

Sequence:


               
               GGTACAGGCCCCACTGGCCTTCTGTGGAAAGCATGGCACCTGCCAGGACTGCGTGCTCGC
CCGGGACCCCTACTGCGCCTGGAGCCCCGCCACGGCCGCCTGCATCACCCTGCACCAGAC
GGATCGCCCCAGCAGGGGTTTGATTCAGGAAATGAACGGGGATGCATCTGCTTGCCCTGC
CTCATCTTCTCTGCCCTTACCCCCTCCGGGGTCCTCTTCCCTCTCCTGTCTGGGCCCCGA
TTCATCTTCCTCCCCCCGAAGCCCCTGGCCGGCCTTGGGCCCGGGGCCTGACAGCCACCG
GCAGGTCACCTTGCTGCCGCCCTTCCTCGGCGACCAGGCCCAGCACGTGCATGCCCTGGG
GACCTTCCACCTCTTCTGCCAGGCCACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTACAGGCCCCACTGGCCTTCTGTGGAAAGCATGGCACCTGCCAGGACTGCGTGCTCGC
CCGGGACCCCTACTGCGCCTGGAGCCCCGCCACGGCCGCCTGCATCACCCTGCACCAGAC
GGATCGCCCCAGCAGGGGTTTGATTCAGGAAATGAACGGGGATGCATCTGCTTGCCCTGC
CTCATCTTCTCTGCCCTTACCCCCTCCGGGGTCCTCTTCCCTCTCCTGTCTGGGCCCCGA
TTCATCTTCCTCCCCCCGAAGCCCCTGGCCGGCCTTGGGCCCGGGGCCTGACAGCCACCG
GCAGGTCACCTTGCTGCCGCCCTTCCTCGGCGACCAGGCCCAGCACGTGCATGCCCTGGG
GACCTTCCACCTCTTCTGCCAGGCCACA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61888038|ref|XP_611782.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61888038|ref|XP_611782.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               219-329, - strand, RNAz p=0.600149

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               219-329, - strand, RNAz p=0.600149

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-136, gnl|bosTau2|chr8 (52091488-52091353)
               

               
               1-136, gnl|Hg17|chr9 (89225777-89225642)
               

               
               1-136, gnl|Mm7|chr13 (50739299-50739164)
               


               
               179-388, gnl|bosTau2|chr8 (52087769-52087560)
               

               
               179-388, gnl|Hg17|chr9 (89221521-89221303)
               

               
               179-388, gnl|Mm7|chr13 (50735133-50734930)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-136, gnl|bosTau2|chr8 (52091488-52091353)
               

               
               1-136, gnl|Hg17|chr9 (89225777-89225642)
               

               
               1-136, gnl|Mm7|chr13 (50739299-50739164)
               


               
               179-388, gnl|bosTau2|chr8 (52087769-52087560)
               

               
               179-388, gnl|Hg17|chr9 (89221521-89221303)
               

               
               179-388, gnl|Mm7|chr13 (50735133-50734930)

	1-136, gnl\|bosTau2\|chr8 (52091488-52091353)
	1-136, gnl\|Hg17\|chr9 (89225777-89225642)
	1-136, gnl\|Mm7\|chr13 (50739299-50739164)

	179-388, gnl\|bosTau2\|chr8 (52087769-52087560)
	179-388, gnl\|Hg17\|chr9 (89221521-89221303)
	179-388, gnl\|Mm7\|chr13 (50735133-50734930)