Non-Coding RNA Search

Pig2-69F14

Sequence:


               
               AGCTCATCTTCAGATGCTCAGCCCCGCCCTGTGCTGTAGGCACACTGCCCTGGGGTGCAC
TCGGCCCTCAGGGACACAGAGATGCTCCTCCTCGCCTGGGACTCTACTCACATCTCATCA
CCTGCTCTCTCTCATCACCTACTTGGTGAAGACCCAACAGTACTTTATTTATAACTGACA
CTGAACCCCTAACACTGCTTTTTTTATGCCCTGTTTTCTTGTAACATACTCTATATTTCT
TTACTTCTTTGTTTTATTATCTTTCTCTGTCAACTACAAATGCAGGAACTTTTGCATATT
TGGTTAGCTACCAAATTTCCCAGTGCTTTAAAGAGGCTTCGGCACATTGTAGGGAATCAA
TAAGTATCTGATGGGAGTCCTCTTGTGGCCTAGTGATTAAAGACTTGGTGTTGTCTCTGC
TGTGTGTCTGGTTCCATCCCTGGCTCAGGGACTTACACATGCCATGAGTGCAGCAAAAAA
AAAACAACAACAAAAACCTGATGAGTGAATGAAAAATCCAACATTATTTAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCTCATCTTCAGATGCTCAGCCCCGCCCTGTGCTGTAGGCACACTGCCCTGGGGTGCAC
TCGGCCCTCAGGGACACAGAGATGCTCCTCCTCGCCTGGGACTCTACTCACATCTCATCA
CCTGCTCTCTCTCATCACCTACTTGGTGAAGACCCAACAGTACTTTATTTATAACTGACA
CTGAACCCCTAACACTGCTTTTTTTATGCCCTGTTTTCTTGTAACATACTCTATATTTCT
TTACTTCTTTGTTTTATTATCTTTCTCTGTCAACTACAAATGCAGGAACTTTTGCATATT
TGGTTAGCTACCAAATTTCCCAGTGCTTTAAAGAGGCTTCGGCACATTGTAGGGAATCAA
TAAGTATCTGATGGGAGTCCTCTTGTGGCCTAGTGATTAAAGACTTGGTGTTGTCTCTGC
TGTGTGTCTGGTTCCATCCCTGGCTCAGGGACTTACACATGCCATGAGTGCAGCAAAAAA
AAAACAACAACAAAAACCTGATGAGTGAATGAAAAATCCAACATTATTTAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               257-373, + strand, RNAz p=0.762577

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               257-373, + strand, RNAz p=0.762577

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-373, gnl|bosTau2|chr20 (35234406-35234779)
               

               
               1-373, gnl|Hg17|chr5 (11517592-11517224)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-373, gnl|bosTau2|chr20 (35234406-35234779)
               

               
               1-373, gnl|Hg17|chr5 (11517592-11517224)

	1-373, gnl\|bosTau2\|chr20 (35234406-35234779)
	1-373, gnl\|Hg17\|chr5 (11517592-11517224)