Non-Coding RNA Search

Pig2-69K23

Sequence:


               
               ATCACCTCCTGTACACGGGCCTCCACACCCTGAAGTCTCTTTTTCACCGCCTGCAGCCCT
TGCTCTGCAGCCTTTGCACGAGCTGATGCCTTAGCCAGCGCACCCTGAATGTCCAGCGCA
TGGTCTGGGCCCTGGCTGTATCCTCCCTGATGGGTGCAGATAATCAGTCCAGCATTTATT
TCCTCCCCACATTCTGACCTCTACCTCTAGCCTCCTGGCCCTTCACCTGGTCTGCCATGC
CTGATGGAGAACACCTTCAGCTTTGGGAAGCTCCTGGCCTATGGCATCTGGTGCAAGGAG
GACATTCTCGATCTGATCCAGCAGGAGAGCAATGCCCACTGCACCACCTTGAGGGAGGGG
CATGCTATGCCAGCAGCTTCACACTCAGCATCCGCACCCTTATCTGTGGGGATGGAGGTA
GGGATCCTGGATGTGAACTCTGATTCCTGACCCAGTGAACCTTGGCCTTAATTTCTCACT
GACCCTGTCTCTGACACCACTACATGTTGTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCACCTCCTGTACACGGGCCTCCACACCCTGAAGTCTCTTTTTCACCGCCTGCAGCCCT
TGCTCTGCAGCCTTTGCACGAGCTGATGCCTTAGCCAGCGCACCCTGAATGTCCAGCGCA
TGGTCTGGGCCCTGGCTGTATCCTCCCTGATGGGTGCAGATAATCAGTCCAGCATTTATT
TCCTCCCCACATTCTGACCTCTACCTCTAGCCTCCTGGCCCTTCACCTGGTCTGCCATGC
CTGATGGAGAACACCTTCAGCTTTGGGAAGCTCCTGGCCTATGGCATCTGGTGCAAGGAG
GACATTCTCGATCTGATCCAGCAGGAGAGCAATGCCCACTGCACCACCTTGAGGGAGGGG
CATGCTATGCCAGCAGCTTCACACTCAGCATCCGCACCCTTATCTGTGGGGATGGAGGTA
GGGATCCTGGATGTGAACTCTGATTCCTGACCCAGTGAACCTTGGCCTTAATTTCTCACT
GACCCTGTCTCTGACACCACTACATGTTGTGCT

Predicted RNA structure(s): 2 entry(ies)

More info

Predicted RNA structure(s): 2 entry(ies)

Help | Less info


               
               40-233, - strand, RNAz p=0.906084
               

               
               353-459, + strand, RNAz p=0.730745

Predicted RNA structure(s): 2 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-233, - strand, RNAz p=0.906084
               

               
               353-459, + strand, RNAz p=0.730745

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-513, gnl|bosTau2|chr22 (37672585-37673111)
               

               
               1-513, gnl|Hg17|chr3 (49148384-49148905)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-513, gnl|bosTau2|chr22 (37672585-37673111)
               

               
               1-513, gnl|Hg17|chr3 (49148384-49148905)

	40-233, - strand, RNAz p=0.906084
	353-459, + strand, RNAz p=0.730745

	1-513, gnl\|bosTau2\|chr22 (37672585-37673111)
	1-513, gnl\|Hg17\|chr3 (49148384-49148905)