Pig2-6E09
|
CTCGGTGTCCGCTGTGCTGCGGGTGCTAAGGTCCTAAGTATGGGTGTCGCCGTTCGAGTC
GTCTATTGTGGCGCTTGAGGCTACAAGTCCAAGTATCTTCAACTCAGAAAGAAGTTAGAA
AATGAGTTCCCTGGACGCCTGGACATCTGTGGCGAGGGGACTCCCCAGGTCACCGGGTTC
TTCGAAGTATTGGTAGCCGGGAAGTTGGTTCACTCCAAGAAGGGAGGTGATGGCTACNTG
GATACCGAGAGCAAGTTTCTGAAGTTGGTGGCTGCCATCAAAGCTGCTTTGGCTCAAGGC
TAATGTGCCCTGAAGGCAGAGTCCAGTGACCTTGGCCC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTCGGTGTCCGCTGTGCTGCGGGTGCTAAGGTCCTAAGTATGGGTGTCGCCGTTCGAGTC
GTCTATTGTGGCGCTTGAGGCTACAAGTCCAAGTATCTTCAACTCAGAAAGAAGTTAGAA
AATGAGTTCCCTGGACGCCTGGACATCTGTGGCGAGGGGACTCCCCAGGTCACCGGGTTC
TTCGAAGTATTGGTAGCCGGGAAGTTGGTTCACTCCAAGAAGGGAGGTGATGGCTACNTG
GATACCGAGAGCAAGTTTCTGAAGTTGGTGGCTGCCATCAAAGCTGCTTTGGCTCAAGGC
TAATGTGCCCTGAAGGCAGAGTCCAGTGACCTTGGCCC
|
|
7-321, - strand, RNAz p=0.957261 |
|
221-338, + strand, RNAz p=0.563885 |
|
221-338, - strand, RNAz p=0.563885 |
|
221-321, + strand, RNAz p=0.902533 |
|
221-321, - strand, RNAz p=0.902533 |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
7-321, - strand, RNAz p=0.957261 |
|
221-338, + strand, RNAz p=0.563885 |
|
221-338, - strand, RNAz p=0.563885 |
|
221-321, + strand, RNAz p=0.902533 |
|
221-321, - strand, RNAz p=0.902533 |
|
7-338, gnl|bosTau2|chr19 (19757126-19757449) |
|
7-338, gnl|Hg17|chr1 (31237534-31236892) |
| |
|
221-321, gnl|bosTau2|chr18 (47655592-47655692) |
|
221-321, gnl|canFam2|chr1 (111173454-111173331) |
|
221-321, gnl|dasNov1|scaffold_6931 (24796-24889) |
|
221-321, gnl|echTel1|scaffold_293112 (7453-7550) |
|
221-321, gnl|hg17|chr19 (52976344-52976470) |
|
221-321, gnl|Hg17|chr19 (52976357-52976457) |
|
221-321, gnl|loxAfr1|scaffold_147148 (4362-4273) |
|
221-321, gnl|mm7|chr7_random (967434-967314) |
|
221-321, gnl|Mm7|chr7_random (967425-967325) |
|
221-321, gnl|monDom2|scaffold_149 (1264803-1264919) |
|
221-321, gnl|oryCun1|scaffold_204523 (58244-58350) |
|
221-321, gnl|panTro1|chr20 (50296942-50297068) |
|
221-321, gnl|rheMac2|chr19 (54106678-54106804) |
|
221-321, gnl|rn3|chr1 (76330530-76330410) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
7-338, gnl|bosTau2|chr19 (19757126-19757449) |
|
7-338, gnl|Hg17|chr1 (31237534-31236892) |
| |
|
221-321, gnl|bosTau2|chr18 (47655592-47655692) |
|
221-321, gnl|canFam2|chr1 (111173454-111173331) |
|
221-321, gnl|dasNov1|scaffold_6931 (24796-24889) |
|
221-321, gnl|echTel1|scaffold_293112 (7453-7550) |
|
221-321, gnl|hg17|chr19 (52976344-52976470) |
|
221-321, gnl|Hg17|chr19 (52976357-52976457) |
|
221-321, gnl|loxAfr1|scaffold_147148 (4362-4273) |
|
221-321, gnl|mm7|chr7_random (967434-967314) |
|
221-321, gnl|Mm7|chr7_random (967425-967325) |
|
221-321, gnl|monDom2|scaffold_149 (1264803-1264919) |
|
221-321, gnl|oryCun1|scaffold_204523 (58244-58350) |
|
221-321, gnl|panTro1|chr20 (50296942-50297068) |
|
221-321, gnl|rheMac2|chr19 (54106678-54106804) |
|
221-321, gnl|rn3|chr1 (76330530-76330410) |
