Pig2-70C15
|
AACAGAGAAGCCTGCTCTGTTGGTTCACCTGGCTTTTACAGCTGAAGATAACACGAACCA
CAAATCTGTTGGGGTTGGTGTTTTCTTGGAGGGGGAGGAGAATTGAGGGAGCCAAATAAA
GAGAAGTTTATGTTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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AACAGAGAAGCCTGCTCTGTTGGTTCACCTGGCTTTTACAGCTGAAGATAACACGAACCA
CAAATCTGTTGGGGTTGGTGTTTTCTTGGAGGGGGAGGAGAATTGAGGGAGCCAAATAAA
GAGAAGTTTATGTTT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-135, gnl|bosTau2|chr6 (5868293-5868427) |
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1-135, gnl|canFam2|chr32 (31847537-31848380) |
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1-135, gnl|echTel1|scaffold_299056 (4511-3659) |
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1-135, gnl|hg17|chr4 (109812033-109812864) |
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1-135, gnl|Hg17|chr4 (109812440-109812305) |
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1-135, gnl|loxAfr1|scaffold_8001 (8774-9603) |
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1-135, gnl|mm7|chr3 (130640913-130640067) |
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1-135, gnl|Mm7|chr3 (130640486-130640620) |
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1-135, gnl|monDom2|scaffold_37 (1178256-1177485) |
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1-135, gnl|oryCun1|scaffold_198304 (39755-40552) |
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1-135, gnl|panTro1|chr3 (126298176-126299005) |
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1-135, gnl|rheMac2|chr5 (101456347-101457181) |
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1-135, gnl|rn3|chr2 (228207448-228206592) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-135, gnl|bosTau2|chr6 (5868293-5868427) |
|
1-135, gnl|canFam2|chr32 (31847537-31848380) |
|
1-135, gnl|echTel1|scaffold_299056 (4511-3659) |
|
1-135, gnl|hg17|chr4 (109812033-109812864) |
|
1-135, gnl|Hg17|chr4 (109812440-109812305) |
|
1-135, gnl|loxAfr1|scaffold_8001 (8774-9603) |
|
1-135, gnl|mm7|chr3 (130640913-130640067) |
|
1-135, gnl|Mm7|chr3 (130640486-130640620) |
|
1-135, gnl|monDom2|scaffold_37 (1178256-1177485) |
|
1-135, gnl|oryCun1|scaffold_198304 (39755-40552) |
|
1-135, gnl|panTro1|chr3 (126298176-126299005) |
|
1-135, gnl|rheMac2|chr5 (101456347-101457181) |
|
1-135, gnl|rn3|chr2 (228207448-228206592) |
