Pig2-77O15
|
GCTGATCTGAGTGCCAGGGATGTACGTGATTCTGTCCCTGGGGGGCGTGCTCGTCCCCCC
CGGATGGGGCACCAAAATCGCGGGAGGCATGTTGGTCAGGTCGATGATGCCCCTGGTTGC
CGGGTACAGGATGCCCAGCTGCTGCTCCCGCGGGGACAGCCCTCGGGCCACGTCCGGGCG
CAGGCTCACTTGCATCTGCTGCGAGGTGATGTAGTCATTCAGGATCGTCTGCCTGGTGTT
CTCCATGGCGTAGAGCTGGTACTGGCTTGGGTAACCGGGGGTCGGTGACATCTGCCTCTG
GAACAGAGTAAGCGGCAGCAGGATCCAGAGCCCGGTGAAACAGCATGGCTGGGTCCAAGT
GCGTGGGCAAGTGGCTCCGATAGGCCTCCCCC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCTGATCTGAGTGCCAGGGATGTACGTGATTCTGTCCCTGGGGGGCGTGCTCGTCCCCCC
CGGATGGGGCACCAAAATCGCGGGAGGCATGTTGGTCAGGTCGATGATGCCCCTGGTTGC
CGGGTACAGGATGCCCAGCTGCTGCTCCCGCGGGGACAGCCCTCGGGCCACGTCCGGGCG
CAGGCTCACTTGCATCTGCTGCGAGGTGATGTAGTCATTCAGGATCGTCTGCCTGGTGTT
CTCCATGGCGTAGAGCTGGTACTGGCTTGGGTAACCGGGGGTCGGTGACATCTGCCTCTG
GAACAGAGTAAGCGGCAGCAGGATCCAGAGCCCGGTGAAACAGCATGGCTGGGTCCAAGT
GCGTGGGCAAGTGGCTCCGATAGGCCTCCCCC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
110-347, gnl|bosTau2|chr19 (23934111-23933874) |
|
110-347, gnl|canFam2|chr5 (42816565-42816310) |
|
110-347, gnl|danRer3|chr5 (49187846-49187603) |
|
110-347, gnl|dasNov1|scaffold_875 (84437-84186) |
|
110-347, gnl|echTel1|scaffold_323836 (85868-86123) |
|
110-347, gnl|fr1|chrUn (259070625-259070378) |
|
110-347, gnl|galGal2|chr19 (6045283-6045538) |
|
110-347, gnl|hg17|chr17 (15909511-15909766) |
|
110-347, gnl|Hg17|chr17 (15909523-15909761) |
|
110-347, gnl|mm7|chr11 (62420412-62420662) |
|
110-347, gnl|Mm7|chr11 (62420416-62420654) |
|
110-347, gnl|monDom2|scaffold_86 (5525125-5525365) |
|
110-347, gnl|oryCun1|scaffold_29829 (1288-1033) |
|
110-347, gnl|panTro1|chr19_random (4786984-4787239) |
|
110-347, gnl|rheMac2|chr16 (16398087-16397832) |
|
110-347, gnl|rn3|chr10 (48516751-48517001) |
|
110-347, gnl|tetNig1|chr7 (2110142-2110356) |
|
110-347, gnl|xenTro1|scaffold_454 (173897-173653) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
110-347, gnl|bosTau2|chr19 (23934111-23933874) |
|
110-347, gnl|canFam2|chr5 (42816565-42816310) |
|
110-347, gnl|danRer3|chr5 (49187846-49187603) |
|
110-347, gnl|dasNov1|scaffold_875 (84437-84186) |
|
110-347, gnl|echTel1|scaffold_323836 (85868-86123) |
|
110-347, gnl|fr1|chrUn (259070625-259070378) |
|
110-347, gnl|galGal2|chr19 (6045283-6045538) |
|
110-347, gnl|hg17|chr17 (15909511-15909766) |
|
110-347, gnl|Hg17|chr17 (15909523-15909761) |
|
110-347, gnl|mm7|chr11 (62420412-62420662) |
|
110-347, gnl|Mm7|chr11 (62420416-62420654) |
|
110-347, gnl|monDom2|scaffold_86 (5525125-5525365) |
|
110-347, gnl|oryCun1|scaffold_29829 (1288-1033) |
|
110-347, gnl|panTro1|chr19_random (4786984-4787239) |
|
110-347, gnl|rheMac2|chr16 (16398087-16397832) |
|
110-347, gnl|rn3|chr10 (48516751-48517001) |
|
110-347, gnl|tetNig1|chr7 (2110142-2110356) |
|
110-347, gnl|xenTro1|scaffold_454 (173897-173653) |
