Non-Coding RNA Search

Pig2-7D12a

Sequence:


               
               ACCCACGCGTCCGCCCACGCGTCCGCCCACGCGTTCGGCACACTCCTAGATGCAGATTGC
TTTGAACGTTGGAACTGTTCAGTTTGGTTTCGTTTGTACCGATTTAAAAAATGTTTTAAT
GGGGAAAATTTGGGGGAGAACCGTGGGTAGGGCCTGGTTCCTTTGCTTCTCGGGGAACTA
CAGGGCCTTGTCCGGAGGACCGCTCTCTGCTCCACTTTCCTGGAAGTTGCCTAAGCCTGT
CCACGCCGTCCAAGCCCTGCGCCCGGATATGACACGTGGCTCCAGTCACGTCTGGGCGCG
GTTGCGTTTTCTCGGGACCTTGCGTGCAGGGGAGGGAGTGGTCAGGCCTCGCGCCGAGTC
CACCCTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCCACGCGTCCGCCCACGCGTCCGCCCACGCGTTCGGCACACTCCTAGATGCAGATTGC
TTTGAACGTTGGAACTGTTCAGTTTGGTTTCGTTTGTACCGATTTAAAAAATGTTTTAAT
GGGGAAAATTTGGGGGAGAACCGTGGGTAGGGCCTGGTTCCTTTGCTTCTCGGGGAACTA
CAGGGCCTTGTCCGGAGGACCGCTCTCTGCTCCACTTTCCTGGAAGTTGCCTAAGCCTGT
CCACGCCGTCCAAGCCCTGCGCCCGGATATGACACGTGGCTCCAGTCACGTCTGGGCGCG
GTTGCGTTTTCTCGGGACCTTGCGTGCAGGGGAGGGAGTGGTCAGGCCTCGCGCCGAGTC
CACCCTTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               227-346, + strand, RNAz p=0.963974

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               227-346, + strand, RNAz p=0.963974

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               38-368, gnl|bosTau2|chr22 (38097363-38097033)
               

               
               38-368, gnl|Hg17|chr3 (49737107-49736805)
               

               
               38-368, gnl|Mm7|chr9 (107780060-107780368)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               38-368, gnl|bosTau2|chr22 (38097363-38097033)
               

               
               38-368, gnl|Hg17|chr3 (49737107-49736805)
               

               
               38-368, gnl|Mm7|chr9 (107780060-107780368)

	38-368, gnl\|bosTau2\|chr22 (38097363-38097033)
	38-368, gnl\|Hg17\|chr3 (49737107-49736805)
	38-368, gnl\|Mm7\|chr9 (107780060-107780368)