Non-Coding RNA Search

Pig2-80A03

Sequence:


               
               TGAGTGTAAGGTATGTGGGAAAGCCTTCAAGTGGTATGGCAGTTTTGTTCAGCATCAGAA
ATTGCACCCCATGGAGAAGAAGCCTTCCAAGGCTCTTGGGCTGTCCCTGATGAGTCCCCA
GGGCCCCTCTGCAGATTTAGCTCCGATACCTCTTCAGGGCCCCTGCTCTGCTCCAGCCAT
GGCTGTGCCCTCGCTGGCCTTCCCACACGCCGTCCTCATTCCTACCTCCAGACCCGTATT
CATGCTGCTGCCCGCCTCTACAGTACCTTCTTCTCCTGTCCAAATAGTACGAGTCTTCCA
GGGTCTTCCTCCCACTGTGAGGCCATCCCCAGTTGTCCTCACCCCTTCTCCTCACCCCTC
GTGAGCTCTGTCTTGGCACTTCTCTGGCTATTACATGCAGCAGATCAAACTGGAGTTTGA
TTTGTGGTTTGTACACTATACATGTGTAACAAGTGTTTGAGCATAAACTCCATTGTAATC
TAAATCTTTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAGTGTAAGGTATGTGGGAAAGCCTTCAAGTGGTATGGCAGTTTTGTTCAGCATCAGAA
ATTGCACCCCATGGAGAAGAAGCCTTCCAAGGCTCTTGGGCTGTCCCTGATGAGTCCCCA
GGGCCCCTCTGCAGATTTAGCTCCGATACCTCTTCAGGGCCCCTGCTCTGCTCCAGCCAT
GGCTGTGCCCTCGCTGGCCTTCCCACACGCCGTCCTCATTCCTACCTCCAGACCCGTATT
CATGCTGCTGCCCGCCTCTACAGTACCTTCTTCTCCTGTCCAAATAGTACGAGTCTTCCA
GGGTCTTCCTCCCACTGTGAGGCCATCCCCAGTTGTCCTCACCCCTTCTCCTCACCCCTC
GTGAGCTCTGTCTTGGCACTTCTCTGGCTATTACATGCAGCAGATCAAACTGGAGTTTGA
TTTGTGGTTTGTACACTATACATGTGTAACAAGTGTTTGAGCATAAACTCCATTGTAATC
TAAATCTTTTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               80-199, - strand, RNAz p=0.992638

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               80-199, - strand, RNAz p=0.992638

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-485, gnl|bosTau2|chr22 (11666879-11667349)
               

               
               1-485, gnl|Hg17|chr3 (40549222-40550025)
               


               
               7-484, gnl|bosTau2|chr18 (4248400-4247930)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-485, gnl|bosTau2|chr22 (11666879-11667349)
               

               
               1-485, gnl|Hg17|chr3 (40549222-40550025)
               


               
               7-484, gnl|bosTau2|chr18 (4248400-4247930)

	1-485, gnl\|bosTau2\|chr22 (11666879-11667349)
	1-485, gnl\|Hg17\|chr3 (40549222-40550025)

	7-484, gnl\|bosTau2\|chr18 (4248400-4247930)