Pig2-81F18
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TAATAAAGGCTTTACTTACTGCAGTAACATCTCAACATATAGAAATTCATGAAGGAACTG TACTGCAAGCTGTGAGAACATGTTACAATATCTACCTAGCAAGCAAAAATCTCATCAATC AGACAACAGCCAAAGCTACTCTTACTCAGATGCTAAATGTTATCTTTGCACGCATGGAAA ACCAAGCATTGCAGGAAGCCAAACAAATGGAGAAAGAAAGGCATCGACAGCACCATCATC TGTTGCAGTCTCCAGTAAGCCATCATGAGCCTGAATCACCTCAGCTTAGATATTTGCCAC CTCAGACTCTTGATCCTGTATCCCAAGAACATGAAGGAGACCTTGATTCCCATACAAATG ATGTGGATAAAAGCCTTCAGGATGATACAGAGCCTGAAAATGGATCTGATATTTCCAGTG CAGAAAATGAACAGACTGAAGCTGATCAGGCAACTGCAGCCGAAACATTATCTAAAAATG ATATCTTATATGATGGAGAAAACCACGAGTGTGAGGAAAAGCCACAAGACATCGTACAGA GCCTTGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TAATAAAGGCTTTACTTACTGCAGTAACATCTCAACATATAGAAATTCATGAAGGAACTG TACTGCAAGCTGTGAGAACATGTTACAATATCTACCTAGCAAGCAAAAATCTCATCAATC AGACAACAGCCAAAGCTACTCTTACTCAGATGCTAAATGTTATCTTTGCACGCATGGAAA ACCAAGCATTGCAGGAAGCCAAACAAATGGAGAAAGAAAGGCATCGACAGCACCATCATC TGTTGCAGTCTCCAGTAAGCCATCATGAGCCTGAATCACCTCAGCTTAGATATTTGCCAC CTCAGACTCTTGATCCTGTATCCCAAGAACATGAAGGAGACCTTGATTCCCATACAAATG ATGTGGATAAAAGCCTTCAGGATGATACAGAGCCTGAAAATGGATCTGATATTTCCAGTG CAGAAAATGAACAGACTGAAGCTGATCAGGCAACTGCAGCCGAAACATTATCTAAAAATG ATATCTTATATGATGGAGAAAACCACGAGTGTGAGGAAAAGCCACAAGACATCGTACAGA GCCTTGT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 347-465, - strand, RNAz p=0.71739 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 347-465, - strand, RNAz p=0.71739 |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 6-188, gnl|bosTau2|chr14 (17792403-17792585) | |
| 6-188, gnl|canFam2|chr29 (19799403-19799548) | |
| 6-188, gnl|canFam2|chr29 (19799421-19799548) | |
| 6-188, gnl|danRer3|chr5 (40961619-40961476) | |
| 6-188, gnl|echTel1|scaffold_208792 (1410-1555) | |
| 6-188, gnl|echTel1|scaffold_208792 (1427-1555) | |
| 6-188, gnl|fr1|chrUn (87673006-87672864) | |
| 6-188, gnl|galGal2|chr2 (114897474-114897615) | |
| 6-188, gnl|hg17|chr16 (31438757-31438885) | |
| 6-188, gnl|hg17|chr8 (68371210-68371356) | |
| 6-188, gnl|Hg17|chr8 (68371402-68371220) | |
| 6-188, gnl|loxAfr1|scaffold_167097 (4696-4552) | |
| 6-188, gnl|loxAfr1|scaffold_167097 (4679-4552) | |
| 6-188, gnl|mm7|chr1 (10355648-10355793) | |
| 6-188, gnl|mm7|chr1 (10355666-10355793) | |
| 6-188, gnl|Mm7|chr1 (10355839-10355657) | |
| 6-188, gnl|monDom2|scaffold_4 (94182615-94182474) | |
| 6-188, gnl|oryCun1|scaffold_173755 (17650-17509) | |
| 6-188, gnl|panTro1|chr18 (32248832-32248960) | |
| 6-188, gnl|panTro1|chr7 (70397951-70398097) | |
| 6-188, gnl|rheMac2|chr20 (29644923-29644795) | |
| 6-188, gnl|rheMac2|chr8 (69924900-69925046) | |
| 6-188, gnl|rn3|chr5 (8518096-8517951) | |
| 6-188, gnl|rn3|chr5 (8518078-8517951) | |
| 6-188, gnl|tetNig1|chr6 (2447522-2447380) | |
| 6-188, gnl|xenTro1|scaffold_109 (466604-466750) | |
| 189-465, gnl|bosTau2|chr14 (17796856-17797132) | |
| 189-465, gnl|Hg17|chr8 (68366912-68366636) | |
| 189-465, gnl|Mm7|chr1 (10352314-10352038) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 6-188, gnl|bosTau2|chr14 (17792403-17792585) | |
| 6-188, gnl|canFam2|chr29 (19799403-19799548) | |
| 6-188, gnl|canFam2|chr29 (19799421-19799548) | |
| 6-188, gnl|danRer3|chr5 (40961619-40961476) | |
| 6-188, gnl|echTel1|scaffold_208792 (1410-1555) | |
| 6-188, gnl|echTel1|scaffold_208792 (1427-1555) | |
| 6-188, gnl|fr1|chrUn (87673006-87672864) | |
| 6-188, gnl|galGal2|chr2 (114897474-114897615) | |
| 6-188, gnl|hg17|chr16 (31438757-31438885) | |
| 6-188, gnl|hg17|chr8 (68371210-68371356) | |
| 6-188, gnl|Hg17|chr8 (68371402-68371220) | |
| 6-188, gnl|loxAfr1|scaffold_167097 (4696-4552) | |
| 6-188, gnl|loxAfr1|scaffold_167097 (4679-4552) | |
| 6-188, gnl|mm7|chr1 (10355648-10355793) | |
| 6-188, gnl|mm7|chr1 (10355666-10355793) | |
| 6-188, gnl|Mm7|chr1 (10355839-10355657) | |
| 6-188, gnl|monDom2|scaffold_4 (94182615-94182474) | |
| 6-188, gnl|oryCun1|scaffold_173755 (17650-17509) | |
| 6-188, gnl|panTro1|chr18 (32248832-32248960) | |
| 6-188, gnl|panTro1|chr7 (70397951-70398097) | |
| 6-188, gnl|rheMac2|chr20 (29644923-29644795) | |
| 6-188, gnl|rheMac2|chr8 (69924900-69925046) | |
| 6-188, gnl|rn3|chr5 (8518096-8517951) | |
| 6-188, gnl|rn3|chr5 (8518078-8517951) | |
| 6-188, gnl|tetNig1|chr6 (2447522-2447380) | |
| 6-188, gnl|xenTro1|scaffold_109 (466604-466750) | |
| 189-465, gnl|bosTau2|chr14 (17796856-17797132) | |
| 189-465, gnl|Hg17|chr8 (68366912-68366636) | |
| 189-465, gnl|Mm7|chr1 (10352314-10352038) |