Non-Coding RNA Search

Pig2-82C01

Sequence:


               
               CCGTGGCCCCTTCAGACTGCGGGTGACGGCCCTGCCTGCCACCAGACCCCTCAATCTTGG
CCATCGTGTGGCCGCCACCTCCATGCCATCCGGGAAGCCCTGTACAGTGGCGCCTCTTGG
AGTTCAAGGAGCCGAAGCTGAGTTGGGCTGAGTGGACTGGGGCCCGCCCCACCACGCCCC
TCCTAGACTGTCCGGGCAGAGGGCAGGGCCAGACCGCAGGTGAGAGCAGGGGTGGGCCAC
TGACCACCGCTTCCTCCCTGACTGGAGCTGCAGGAGCCCGGAGCTTCCTCTAGTCCCCCG
GCCCCCTGGCTCTCCCTAGGCCCCTGGTGGGTGTGGAGCAGCCAGGAGAGGGGTCCTTGC
CAGTTCCAAATAAAGCAGGACCCACCCNaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaa

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGTGGCCCCTTCAGACTGCGGGTGACGGCCCTGCCTGCCACCAGACCCCTCAATCTTGG
CCATCGTGTGGCCGCCACCTCCATGCCATCCGGGAAGCCCTGTACAGTGGCGCCTCTTGG
AGTTCAAGGAGCCGAAGCTGAGTTGGGCTGAGTGGACTGGGGCCCGCCCCACCACGCCCC
TCCTAGACTGTCCGGGCAGAGGGCAGGGCCAGACCGCAGGTGAGAGCAGGGGTGGGCCAC
TGACCACCGCTTCCTCCCTGACTGGAGCTGCAGGAGCCCGGAGCTTCCTCTAGTCCCCCG
GCCCCCTGGCTCTCCCTAGGCCCCTGGTGGGTGTGGAGCAGCCAGGAGAGGGGTCCTTGC
CAGTTCCAAATAAAGCAGGACCCACCCNaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaa

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               200-387, + strand, RNAz p=0.996865

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               200-387, + strand, RNAz p=0.996865

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               151-268, - strand, RNAmicro p=0.980973

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               151-268, - strand, RNAmicro p=0.980973

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-387, gnl|bosTau2|chr7 (4441215-4440821)
               

               
               1-387, gnl|Hg17|chr19 (17970190-17970515)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-387, gnl|bosTau2|chr7 (4441215-4440821)
               

               
               1-387, gnl|Hg17|chr19 (17970190-17970515)

	1-387, gnl\|bosTau2\|chr7 (4441215-4440821)
	1-387, gnl\|Hg17\|chr19 (17970190-17970515)