Non-Coding RNA Search

Pig2-82G04

Sequence:


               
               CTTTCATAATGAGTTCCTCTTTTGCTGACAGTATGGTGAATTAATTGTTTTCCTCCTAAA
ACCAGTCTTTCTTAGTAAGCACAACCTTTAAAGATCACAGACTTATGAGTTAAGCAGACT
TAGGTTTGTATCCTCCTCTAGGAAATAAGCGAAATAATCCTTACTTCCTGGGATTGCTGT
GCAGGATGAGATGATGCATAAGGTGCTCGCAGCGGCACTCTGTAACTGGTCCAGGTAATG
GCTATTGTATTACTATAGGAGTGAGTTCAGCTTTTCTTGAGAATTCCAAAGGGATCCAGG
AAGGATGCCTGGCGCTCCATTGTCCAGGCGCTCCATTGTCCAGTCCATAAATATCCCCTG
CCTAGTTTCATAGCATGGATAAGAGCCTGCCTTCCACTGTCTGGAAAGACCTGGACCAAA
CACTGGTAAATGTTCTTAGGGTCCTTTGCTGGGTCCATAACCCCCTGCCACCCAGCATCC
TCACTGAGTCCCCCTTCAATGTTAACCTCATCAAAGCATGAGGGAGAAGTTTATTTCTTG
TCCCACCAGTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTCATAATGAGTTCCTCTTTTGCTGACAGTATGGTGAATTAATTGTTTTCCTCCTAAA
ACCAGTCTTTCTTAGTAAGCACAACCTTTAAAGATCACAGACTTATGAGTTAAGCAGACT
TAGGTTTGTATCCTCCTCTAGGAAATAAGCGAAATAATCCTTACTTCCTGGGATTGCTGT
GCAGGATGAGATGATGCATAAGGTGCTCGCAGCGGCACTCTGTAACTGGTCCAGGTAATG
GCTATTGTATTACTATAGGAGTGAGTTCAGCTTTTCTTGAGAATTCCAAAGGGATCCAGG
AAGGATGCCTGGCGCTCCATTGTCCAGGCGCTCCATTGTCCAGTCCATAAATATCCCCTG
CCTAGTTTCATAGCATGGATAAGAGCCTGCCTTCCACTGTCTGGAAAGACCTGGACCAAA
CACTGGTAAATGTTCTTAGGGTCCTTTGCTGGGTCCATAACCCCCTGCCACCCAGCATCC
TCACTGAGTCCCCCTTCAATGTTAACCTCATCAAAGCATGAGGGAGAAGTTTATTTCTTG
TCCCACCAGTTTTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               78-194, + strand, RNAz p=0.831997

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               78-194, + strand, RNAz p=0.831997

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-546, gnl|bosTau2|chr23 (18862292-18861739)
               

               
               1-546, gnl|Hg17|chr6 (46835976-46836507)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-546, gnl|bosTau2|chr23 (18862292-18861739)
               

               
               1-546, gnl|Hg17|chr6 (46835976-46836507)

	1-546, gnl\|bosTau2\|chr23 (18862292-18861739)
	1-546, gnl\|Hg17\|chr6 (46835976-46836507)