Non-Coding RNA Search

Pig2-83G04

Sequence:


               
               GGACAGAAGAGCTGGCACTCAGGGATGTGGGAGAAGGGGATGCCTTGTATGAGGCCCTAG
TTAATGTGGCCACTAAAGAGTCCTAGCTCCTTCTACACTGCTTGGTCAGTAAACAGGACC
TCAGGGGCTGTGGGCTACAGGGCTGTGGCAAGCGGGGTTCCAGCTTGGAGGCCTCAGCCC
CAGCTGACCCTCAGGACCAGGCTGGCCCTTCATGGCCAGGGGTAGAGACCTGGCTTATCT
CTCCAGCTGCCCTGTTCCCTGCCACTTTATCAGGGACAGGGGAAGGTGTCAGAGCTCAGA
ACTGCCACTTCTCCCTCCCCGTGGGATTGGACCCAGGTGCAAGCATAAGGACAGCTCTTG
GGCACAGCCAGAAAGCCTCTGCCCTGGGAGCGTTTAAAAGGCTGCAGGACCTTCTCAGCC
TCAGTTGAACTTCCTCACTGGCTTCAGCATGTGGGGGCTGCTGATTTTTAGTGTATTATT
GGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACAGAAGAGCTGGCACTCAGGGATGTGGGAGAAGGGGATGCCTTGTATGAGGCCCTAG
TTAATGTGGCCACTAAAGAGTCCTAGCTCCTTCTACACTGCTTGGTCAGTAAACAGGACC
TCAGGGGCTGTGGGCTACAGGGCTGTGGCAAGCGGGGTTCCAGCTTGGAGGCCTCAGCCC
CAGCTGACCCTCAGGACCAGGCTGGCCCTTCATGGCCAGGGGTAGAGACCTGGCTTATCT
CTCCAGCTGCCCTGTTCCCTGCCACTTTATCAGGGACAGGGGAAGGTGTCAGAGCTCAGA
ACTGCCACTTCTCCCTCCCCGTGGGATTGGACCCAGGTGCAAGCATAAGGACAGCTCTTG
GGCACAGCCAGAAAGCCTCTGCCCTGGGAGCGTTTAAAAGGCTGCAGGACCTTCTCAGCC
TCAGTTGAACTTCCTCACTGGCTTCAGCATGTGGGGGCTGCTGATTTTTAGTGTATTATT
GGGGG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               81-275, - strand, RNAz p=0.998816

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               81-275, - strand, RNAz p=0.998816

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               158-247, - strand, RNAmicro p=0.999904

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               158-247, - strand, RNAmicro p=0.999904

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               3-485, gnl|bosTau2|chr4 (50715117-50714648)
               

               
               3-485, gnl|Hg17|chr7 (129613871-129614349)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-485, gnl|bosTau2|chr4 (50715117-50714648)
               

               
               3-485, gnl|Hg17|chr7 (129613871-129614349)

	3-485, gnl\|bosTau2\|chr4 (50715117-50714648)
	3-485, gnl\|Hg17\|chr7 (129613871-129614349)