Pig2-84J01
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GCGAATCAACAGAGCCACAAACCCTCTGAACAAGAGCTGAACTGGGCCAGCATCAACGGC
TTCTGCGAGCAGCTCAACGAGGACTTTGAGGGGCCTCCACTTGCCACCCGGCTGTTGGCC
CACAAGATCCAGTCCCCGCAGGAGTGGGAGGCGATCCAGGCCCTGACGGTGCTGGAAACA
TGCATGAAGAGCTGTGGCAAGAGGTTCCACGATGAGGTGGGCAAGTTCCGCTTCCTCAAC
GAGCTCATCAAGGTCGTGTCTCCCAAGTACCTGGGCTCGCGGACGTCGGAGAAGGTGAAG
AACAAGATCCTGGAGCTCCTCTACAGCTGGACGGTCGGCCTCCCCGAGGAGGTGAAGATC
GCAGAGGCCTACCAGATGCTGAAGAAGCAGGGGATCGTGAAGGCCGACCCCAAGCTTCCG
GATGACGCCGCCCTTCCCTTTCTCCACCGCGGCCCAAGAATGTGATCTTTGAGGACGA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GCGAATCAACAGAGCCACAAACCCTCTGAACAAGAGCTGAACTGGGCCAGCATCAACGGC
TTCTGCGAGCAGCTCAACGAGGACTTTGAGGGGCCTCCACTTGCCACCCGGCTGTTGGCC
CACAAGATCCAGTCCCCGCAGGAGTGGGAGGCGATCCAGGCCCTGACGGTGCTGGAAACA
TGCATGAAGAGCTGTGGCAAGAGGTTCCACGATGAGGTGGGCAAGTTCCGCTTCCTCAAC
GAGCTCATCAAGGTCGTGTCTCCCAAGTACCTGGGCTCGCGGACGTCGGAGAAGGTGAAG
AACAAGATCCTGGAGCTCCTCTACAGCTGGACGGTCGGCCTCCCCGAGGAGGTGAAGATC
GCAGAGGCCTACCAGATGCTGAAGAAGCAGGGGATCGTGAAGGCCGACCCCAAGCTTCCG
GATGACGCCGCCCTTCCCTTTCTCCACCGCGGCCCAAGAATGTGATCTTTGAGGACGA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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258-392, gnl|bosTau2|chr5 (67335549-67335415) |
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258-392, gnl|canFam2|chr10 (30056214-30056061) |
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258-392, gnl|danRer3|chr2 (45046057-45045909) |
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258-392, gnl|dasNov1|scaffold_3648 (37727-37879) |
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258-392, gnl|echTel1|scaffold_91930 (603-757) |
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258-392, gnl|fr1|chrUn (167954445-167954318) |
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258-392, gnl|galGal2|chr1 (47902760-47902606) |
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258-392, gnl|hg17|chr22 (36340726-36340880) |
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258-392, gnl|Hg17|chr22 (36340735-36340869) |
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258-392, gnl|loxAfr1|scaffold_23968 (15236-15391) |
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258-392, gnl|mm7|chr15 (78967018-78967172) |
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258-392, gnl|Mm7|chr15 (78967027-78967161) |
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258-392, gnl|monDom2|scaffold_34 (386359-386203) |
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258-392, gnl|oryCun1|scaffold_183169 (15317-15468) |
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258-392, gnl|panTro1|chr23 (36518714-36518868) |
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258-392, gnl|rheMac2|chr10 (81532259-81532413) |
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258-392, gnl|rn3|chr7 (116884708-116884862) |
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258-392, gnl|tetNig1|chrUn_random (100781508-100781646) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
258-392, gnl|bosTau2|chr5 (67335549-67335415) |
|
258-392, gnl|canFam2|chr10 (30056214-30056061) |
|
258-392, gnl|danRer3|chr2 (45046057-45045909) |
|
258-392, gnl|dasNov1|scaffold_3648 (37727-37879) |
|
258-392, gnl|echTel1|scaffold_91930 (603-757) |
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258-392, gnl|fr1|chrUn (167954445-167954318) |
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258-392, gnl|galGal2|chr1 (47902760-47902606) |
|
258-392, gnl|hg17|chr22 (36340726-36340880) |
|
258-392, gnl|Hg17|chr22 (36340735-36340869) |
|
258-392, gnl|loxAfr1|scaffold_23968 (15236-15391) |
|
258-392, gnl|mm7|chr15 (78967018-78967172) |
|
258-392, gnl|Mm7|chr15 (78967027-78967161) |
|
258-392, gnl|monDom2|scaffold_34 (386359-386203) |
|
258-392, gnl|oryCun1|scaffold_183169 (15317-15468) |
|
258-392, gnl|panTro1|chr23 (36518714-36518868) |
|
258-392, gnl|rheMac2|chr10 (81532259-81532413) |
|
258-392, gnl|rn3|chr7 (116884708-116884862) |
|
258-392, gnl|tetNig1|chrUn_random (100781508-100781646) |
