Pig2-85H05
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCCAATGGCCATGTGTCTCAGGACCAAGAGGAACCCGGCTACCTGGAGAGCACAGCCAG ACCCCCTGCCGAGGATGAGACCCAGTCCATCGACTCCGAGGACAGCTTCGTCCCAGGCCG GAGGGCCTCTCTGTCCGACCTGACTGACCTGGAGGACATCGAAGGGCTCACCGTGCGGCA GCTCAAAGAGATCCTGGCTCGCAACTTCGTCAACTACAAGGGCTGCTGTGAGAAGTGGGA GCTGATGGAGAGGGTGACGCGGCTGTACAAGGATCAGAAGGGACTCCAGCACCTGGTGTG TGGTGCCGAGGACCAAAACGGGGGAGCGGTGCCGTCCAGCCTGGAGGAGAACCTGTGTCG GATCTGCATGGACTCGCCCATTGACTGTGTTCTGCTGGAGTGCGGCCACATGGTGACCTG TACCAAGTGTGGCAAGCGCATGAACGAGTGTCCCATCTGCCGGCAGTACGTGATCCGAGC CGTGCACGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCCAATGGCCATGTGTCTCAGGACCAAGAGGAACCCGGCTACCTGGAGAGCACAGCCAG ACCCCCTGCCGAGGATGAGACCCAGTCCATCGACTCCGAGGACAGCTTCGTCCCAGGCCG GAGGGCCTCTCTGTCCGACCTGACTGACCTGGAGGACATCGAAGGGCTCACCGTGCGGCA GCTCAAAGAGATCCTGGCTCGCAACTTCGTCAACTACAAGGGCTGCTGTGAGAAGTGGGA GCTGATGGAGAGGGTGACGCGGCTGTACAAGGATCAGAAGGGACTCCAGCACCTGGTGTG TGGTGCCGAGGACCAAAACGGGGGAGCGGTGCCGTCCAGCCTGGAGGAGAACCTGTGTCG GATCTGCATGGACTCGCCCATTGACTGTGTTCTGCTGGAGTGCGGCCACATGGTGACCTG TACCAAGTGTGGCAAGCGCATGAACGAGTGTCCCATCTGCCGGCAGTACGTGATCCGAGC CGTGCACGTC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 178-273, + strand, RNAz p=0.944159 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 178-273, + strand, RNAz p=0.944159 |
| Aligned organism(s): 68 entry(ies) | More info |
| Aligned organism(s): 68 entry(ies) | Help | Less info |
| 83-308, gnl|bosTau2|chr19 (8907970-8907746) | |
| 83-308, gnl|Hg17|chr17 (30367715-30367491) | |
| 83-308, gnl|Mm7|chr11 (82891796-82891573) | |
| 121-273, gnl|bosTau2|chr17 (28426875-28427027) | |
| 121-273, gnl|canFam2|chr24 (19791960-19791797) | |
| 121-273, gnl|dasNov1|scaffold_263024 (1094-924) | |
| 121-273, gnl|echTel1|scaffold_282888 (14329-14469) | |
| 121-273, gnl|Hg17|chr12 (120321126-120321278) | |
| 121-273, gnl|hg17|chr20 (4677575-4677740) | |
| 121-273, gnl|loxAfr1|scaffold_6014 (60230-60407) | |
| 121-273, gnl|mm7|chr2 (131721784-131721944) | |
| 121-273, gnl|Mm7|chr5 (122101368-122101520) | |
| 121-273, gnl|oryCun1|scaffold_114411 (6458-6300) | |
| 121-273, gnl|panTro1|chr21 (4645512-4645677) | |
| 121-273, gnl|rheMac2|chr10 (38085776-38085938) | |
| 121-273, gnl|rn3|chr3 (119625820-119625980) | |
| 320-490, gnl|bosTau2|chr19 (8904090-8903920) | |
| 320-490, gnl|canFam2|chr9 (41663047-41662885) | |
| 320-490, gnl|danRer3|chr15 (7389683-7389844) | |
| 320-490, gnl|dasNov1|scaffold_3522 (30989-30827) | |
| 320-490, gnl|echTel1|scaffold_313042 (54808-54646) | |
| 320-490, gnl|fr1|chrUn (299952966-299953128) | |
| 320-490, gnl|galGal2|chr19 (4224759-4224597) | |
| 320-490, gnl|hg17|chr17 (30363100-30363262) | |
| 320-490, gnl|Hg17|chr17 (30363282-30363112) | |
| 320-490, gnl|loxAfr1|scaffold_618 (12551-12713) | |
| 320-490, gnl|mm7|chr11 (82887583-82887745) | |
| 320-490, gnl|Mm7|chr11 (82887765-82887595) | |
| 320-490, gnl|monDom2|scaffold_44 (7659057-7658895) | |
| 320-490, gnl|oryCun1|scaffold_190408 (48094-48256) | |
| 320-490, gnl|panTro1|chr19 (33884572-33884734) | |
| 320-490, gnl|rheMac2|chr16 (30309167-30309329) | |
| 320-490, gnl|rn3|chr10 (71039003-71039165) | |
| 320-490, gnl|tetNig1|chrUn_random (135899161-135898999) | |
| 320-490, gnl|xenTro1|scaffold_56 (1858452-1858294) | |
| 343-489, gnl|bosTau2|chr17 (28428923-28429069) | |
| 343-489, gnl|canFam2|chr26 (10769323-10769110) | |
| 343-489, gnl|canFam2|chr26 (10769106-10769221) | |
| 343-489, gnl|danRer3|chr15 (7389679-7389800) | |
| 343-489, gnl|danRer3|chrUn (13457898-13457688) | |
| 343-489, gnl|dasNov1|scaffold_4820 (23051-22840) | |
| 343-489, gnl|dasNov1|scaffold_4820 (22836-22951) | |
| 343-489, gnl|echTel1|scaffold_283762 (40756-40546) | |
| 343-489, gnl|echTel1|scaffold_283762 (40544-40656) | |
| 343-489, gnl|fr1|chrUn (42008186-42008388) | |
| 343-489, gnl|fr1|chrUn (42008388-42008278) | |
| 343-489, gnl|galGal2|chr15 (5427913-5428122) | |
| 343-489, gnl|hg17|chr12 (120323887-120324100) | |
| 343-489, gnl|Hg17|chr12 (120323940-120324086) | |
| 343-489, gnl|hg17|chrX (84912719-84912834) | |
| 343-489, gnl|loxAfr1|scaffold_618 (12754-12552) | |
| 343-489, gnl|loxAfr1|scaffold_618 (12548-12662) | |
| 343-489, gnl|mm7|chr5 (122102235-122102450) | |
| 343-489, gnl|mm7|chr5 (122102454-122102339) | |
| 343-489, gnl|Mm7|chr5 (122102290-122102436) | |
| 343-489, gnl|monDom2|scaffold_68 (1966949-1966835) | |
| 343-489, gnl|monDom2|scaffold_97 (1587929-1588141) | |
| 343-489, gnl|oryCun1|scaffold_186471 (46127-46224) | |
| 343-489, gnl|oryCun1|scaffold_201580 (60199-59988) | |
| 343-489, gnl|panTro1|chr10 (123412130-123412343) | |
| 343-489, gnl|panTro1|chrX (87614541-87614656) | |
| 343-489, gnl|rheMac2|chr11 (122505651-122505864) | |
| 343-489, gnl|rheMac2|chrX (84663466-84663581) | |
| 343-489, gnl|rn3|chr12 (34669451-34669245) | |
| 343-489, gnl|rn3|chr12 (34669241-34669356) | |
| 343-489, gnl|tetNig1|chr4 (1633231-1633044) | |
| 343-489, gnl|tetNig1|chr4 (1633043-1633154) | |
| 343-489, gnl|xenTro1|scaffold_501 (898383-898583) |
| Aligned organism(s): 68 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 83-308, gnl|bosTau2|chr19 (8907970-8907746) | |
| 83-308, gnl|Hg17|chr17 (30367715-30367491) | |
| 83-308, gnl|Mm7|chr11 (82891796-82891573) | |
| 121-273, gnl|bosTau2|chr17 (28426875-28427027) | |
| 121-273, gnl|canFam2|chr24 (19791960-19791797) | |
| 121-273, gnl|dasNov1|scaffold_263024 (1094-924) | |
| 121-273, gnl|echTel1|scaffold_282888 (14329-14469) | |
| 121-273, gnl|Hg17|chr12 (120321126-120321278) | |
| 121-273, gnl|hg17|chr20 (4677575-4677740) | |
| 121-273, gnl|loxAfr1|scaffold_6014 (60230-60407) | |
| 121-273, gnl|mm7|chr2 (131721784-131721944) | |
| 121-273, gnl|Mm7|chr5 (122101368-122101520) | |
| 121-273, gnl|oryCun1|scaffold_114411 (6458-6300) | |
| 121-273, gnl|panTro1|chr21 (4645512-4645677) | |
| 121-273, gnl|rheMac2|chr10 (38085776-38085938) | |
| 121-273, gnl|rn3|chr3 (119625820-119625980) | |
| 320-490, gnl|bosTau2|chr19 (8904090-8903920) | |
| 320-490, gnl|canFam2|chr9 (41663047-41662885) | |
| 320-490, gnl|danRer3|chr15 (7389683-7389844) | |
| 320-490, gnl|dasNov1|scaffold_3522 (30989-30827) | |
| 320-490, gnl|echTel1|scaffold_313042 (54808-54646) | |
| 320-490, gnl|fr1|chrUn (299952966-299953128) | |
| 320-490, gnl|galGal2|chr19 (4224759-4224597) | |
| 320-490, gnl|hg17|chr17 (30363100-30363262) | |
| 320-490, gnl|Hg17|chr17 (30363282-30363112) | |
| 320-490, gnl|loxAfr1|scaffold_618 (12551-12713) | |
| 320-490, gnl|mm7|chr11 (82887583-82887745) | |
| 320-490, gnl|Mm7|chr11 (82887765-82887595) | |
| 320-490, gnl|monDom2|scaffold_44 (7659057-7658895) | |
| 320-490, gnl|oryCun1|scaffold_190408 (48094-48256) | |
| 320-490, gnl|panTro1|chr19 (33884572-33884734) | |
| 320-490, gnl|rheMac2|chr16 (30309167-30309329) | |
| 320-490, gnl|rn3|chr10 (71039003-71039165) | |
| 320-490, gnl|tetNig1|chrUn_random (135899161-135898999) | |
| 320-490, gnl|xenTro1|scaffold_56 (1858452-1858294) | |
| 343-489, gnl|bosTau2|chr17 (28428923-28429069) | |
| 343-489, gnl|canFam2|chr26 (10769323-10769110) | |
| 343-489, gnl|canFam2|chr26 (10769106-10769221) | |
| 343-489, gnl|danRer3|chr15 (7389679-7389800) | |
| 343-489, gnl|danRer3|chrUn (13457898-13457688) | |
| 343-489, gnl|dasNov1|scaffold_4820 (23051-22840) | |
| 343-489, gnl|dasNov1|scaffold_4820 (22836-22951) | |
| 343-489, gnl|echTel1|scaffold_283762 (40756-40546) | |
| 343-489, gnl|echTel1|scaffold_283762 (40544-40656) | |
| 343-489, gnl|fr1|chrUn (42008186-42008388) | |
| 343-489, gnl|fr1|chrUn (42008388-42008278) | |
| 343-489, gnl|galGal2|chr15 (5427913-5428122) | |
| 343-489, gnl|hg17|chr12 (120323887-120324100) | |
| 343-489, gnl|Hg17|chr12 (120323940-120324086) | |
| 343-489, gnl|hg17|chrX (84912719-84912834) | |
| 343-489, gnl|loxAfr1|scaffold_618 (12754-12552) | |
| 343-489, gnl|loxAfr1|scaffold_618 (12548-12662) | |
| 343-489, gnl|mm7|chr5 (122102235-122102450) | |
| 343-489, gnl|mm7|chr5 (122102454-122102339) | |
| 343-489, gnl|Mm7|chr5 (122102290-122102436) | |
| 343-489, gnl|monDom2|scaffold_68 (1966949-1966835) | |
| 343-489, gnl|monDom2|scaffold_97 (1587929-1588141) | |
| 343-489, gnl|oryCun1|scaffold_186471 (46127-46224) | |
| 343-489, gnl|oryCun1|scaffold_201580 (60199-59988) | |
| 343-489, gnl|panTro1|chr10 (123412130-123412343) | |
| 343-489, gnl|panTro1|chrX (87614541-87614656) | |
| 343-489, gnl|rheMac2|chr11 (122505651-122505864) | |
| 343-489, gnl|rheMac2|chrX (84663466-84663581) | |
| 343-489, gnl|rn3|chr12 (34669451-34669245) | |
| 343-489, gnl|rn3|chr12 (34669241-34669356) | |
| 343-489, gnl|tetNig1|chr4 (1633231-1633044) | |
| 343-489, gnl|tetNig1|chr4 (1633043-1633154) | |
| 343-489, gnl|xenTro1|scaffold_501 (898383-898583) |