Non-Coding RNA Search

Pig2-85I05

Sequence:


               
               CGAAGTCCTGAGACCGAGCCAGAGAGGGAGCAGGAACCAGTGCGCGACGTCGGGTCTGAG
AGACCCCAGGGCAGCCAGGAGCTGGAGCTGGTGGAGAGCCTGCTGAAGAGCAGACCAGAG
GAGCCCGAGGGCTGCTGGGAGGCACGCAGCGTCGGGGCGGGGGCCCCACGGAGCAGCTCA
GGCCGCCAGGAGCGCAGCCGGCTGCCCTGGGAGGATGCCGCCACCCTCGAAGAGGACACC
TCCAAGTTGACAGCCCTGCGGCTACGGCTGGATGAGTCCCAGAAGGTGCTGCTCAAGGAG
CGAGAGGATAAAATGGCCCTGAGCAGGAACATCGAGAAGCTGGAGGGGGAGCTCAGCCAG
TGGAAGATCAAGTATGAAGAGCTGAGCAAGACCAAGCAGGAGATGCTCAAGCAACTCAGC
ATCCTGAAGGAGGCTCACCAGGACGAGCTGGGCCGCATGTCCGAAGACCTGGAGGACGAG
CTGGGAGCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGAAGTCCTGAGACCGAGCCAGAGAGGGAGCAGGAACCAGTGCGCGACGTCGGGTCTGAG
AGACCCCAGGGCAGCCAGGAGCTGGAGCTGGTGGAGAGCCTGCTGAAGAGCAGACCAGAG
GAGCCCGAGGGCTGCTGGGAGGCACGCAGCGTCGGGGCGGGGGCCCCACGGAGCAGCTCA
GGCCGCCAGGAGCGCAGCCGGCTGCCCTGGGAGGATGCCGCCACCCTCGAAGAGGACACC
TCCAAGTTGACAGCCCTGCGGCTACGGCTGGATGAGTCCCAGAAGGTGCTGCTCAAGGAG
CGAGAGGATAAAATGGCCCTGAGCAGGAACATCGAGAAGCTGGAGGGGGAGCTCAGCCAG
TGGAAGATCAAGTATGAAGAGCTGAGCAAGACCAAGCAGGAGATGCTCAAGCAACTCAGC
ATCCTGAAGGAGGCTCACCAGGACGAGCTGGGCCGCATGTCCGAAGACCTGGAGGACGAG
CTGGGAGCGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55644653|ref|XP_523503.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55644653|ref|XP_523503.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               77-195, + strand, RNAz p=0.742853

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               77-195, + strand, RNAz p=0.742853

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               77-306, gnl|bosTau2|chr18 (21428055-21428281)
               

               
               77-306, gnl|Hg17|chr16 (56117542-56117313)
               

               
               77-306, gnl|Mm7|chr8 (93500700-93500471)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               77-306, gnl|bosTau2|chr18 (21428055-21428281)
               

               
               77-306, gnl|Hg17|chr16 (56117542-56117313)
               

               
               77-306, gnl|Mm7|chr8 (93500700-93500471)

	77-306, gnl\|bosTau2\|chr18 (21428055-21428281)
	77-306, gnl\|Hg17\|chr16 (56117542-56117313)
	77-306, gnl\|Mm7\|chr8 (93500700-93500471)