Non-Coding RNA Search

Pig2-86H24

Sequence:


               
               AGAATCCATGGCGCAGGAAGGCTGGTGGTGAGGCCGCGATAGCCACAGCCGCCAGGTGGG
GGGACCCGGCGCTGTCCTCGCACAGGCGGGCCTCAGCCCCCTGCCTCCCGCCCTCCTGCA
GGTCGATGGGGACATCCCTCCCCGGGTGAAGAAGGACGCCCACCAGCTCATGCTGGACTT
CATCCGCTCCAGGCCGCCGCTGAAGCAGGTCTCCGAGAGAAGGCTGCGCCCCTTACCCCA
GAAGCAGAGGACTCTGCACGAGAAGATCCTGGAGGAGATCAAGCAGGAACGCATGCTGCG
CCCCGTGGAGGGCAGGCACCGGGACGGCCGGGGCTTCGGCTCTCTGCCCTGCATCCTCAA
CGCCTGCTCTGGGGATGTCAAGTCCACCTCGTGCATCAACCTCTCCGTCACGGACGCCGG
GAGCAGCGCCCAGCGCCCGCGGCCCCCGGGTTCTGCTCAAGGCGCCCACGTTGGCCGAGA
TGGAGGAGATGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAATCCATGGCGCAGGAAGGCTGGTGGTGAGGCCGCGATAGCCACAGCCGCCAGGTGGG
GGGACCCGGCGCTGTCCTCGCACAGGCGGGCCTCAGCCCCCTGCCTCCCGCCCTCCTGCA
GGTCGATGGGGACATCCCTCCCCGGGTGAAGAAGGACGCCCACCAGCTCATGCTGGACTT
CATCCGCTCCAGGCCGCCGCTGAAGCAGGTCTCCGAGAGAAGGCTGCGCCCCTTACCCCA
GAAGCAGAGGACTCTGCACGAGAAGATCCTGGAGGAGATCAAGCAGGAACGCATGCTGCG
CCCCGTGGAGGGCAGGCACCGGGACGGCCGGGGCTTCGGCTCTCTGCCCTGCATCCTCAA
CGCCTGCTCTGGGGATGTCAAGTCCACCTCGTGCATCAACCTCTCCGTCACGGACGCCGG
GAGCAGCGCCCAGCGCCCGCGGCCCCCGGGTTCTGCTCAAGGCGCCCACGTTGGCCGAGA
TGGAGGAGATGAC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|50796675|ref|XP_428220.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|50796675|ref|XP_428220.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               73-182, - strand, RNAz p=0.738308

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               73-182, - strand, RNAz p=0.738308

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               1-210, gnl|bosTau2|chr18 (15557596-15557822)
               

               
               1-210, gnl|Mm7|chr8 (121998540-121998801)
               


               
               332-492, gnl|bosTau2|chr18 (15558147-15558306)
               

               
               332-492, gnl|Hg17|chr16 (88452246-88452405)
               

               
               332-492, gnl|Mm7|chr8 (122000411-122000570)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-210, gnl|bosTau2|chr18 (15557596-15557822)
               

               
               1-210, gnl|Mm7|chr8 (121998540-121998801)
               


               
               332-492, gnl|bosTau2|chr18 (15558147-15558306)
               

               
               332-492, gnl|Hg17|chr16 (88452246-88452405)
               

               
               332-492, gnl|Mm7|chr8 (122000411-122000570)

	1-210, gnl\|bosTau2\|chr18 (15557596-15557822)
	1-210, gnl\|Mm7\|chr8 (121998540-121998801)

	332-492, gnl\|bosTau2\|chr18 (15558147-15558306)
	332-492, gnl\|Hg17\|chr16 (88452246-88452405)
	332-492, gnl\|Mm7\|chr8 (122000411-122000570)