Non-Coding RNA Search

Pig2-87J02

Sequence:


               
               TGCTGACCTAATGTGGATTGTTGAAGCAGTGTGTTTACTGCTAGCAGAGGAACGTCACTG
GAAATGTTCCCAGCTCTGAAATGCACCATTGACTGGAGCAGTAATAAGTCCCATGGAGAC
AGTGCTGTCAGTGTATTACTTCTGAATATTAACAGCTGGAGGTCGATACTATCTCCAAGG
ATTTGATGGCCTTTAAAAGCTAAAGAAAAAAACAGGTTTGTGGGTAATTTTAGGTTCGTT
TATAGATTTGCGTTGGGCAAGAATGGAATGTTAGAAATCTAAAGTATTATGTGCTTATAG
TAAAGTTTACTTCAAAGGAACTCATGTGCGCATCTGATGATGGTTTTGCTTCACCGTGGT
GTACACAGCTTGCTGCAGAGACATCATCTCCACACACACACACCCCCACACACACACCCA
CACACCCGGAACTGGAGATAAAAGACAGTATATTTCTTTATTTAAAATGATTACAAAGCT
TTCCTTTCTCACATGTGTCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCTGACCTAATGTGGATTGTTGAAGCAGTGTGTTTACTGCTAGCAGAGGAACGTCACTG
GAAATGTTCCCAGCTCTGAAATGCACCATTGACTGGAGCAGTAATAAGTCCCATGGAGAC
AGTGCTGTCAGTGTATTACTTCTGAATATTAACAGCTGGAGGTCGATACTATCTCCAAGG
ATTTGATGGCCTTTAAAAGCTAAAGAAAAAAACAGGTTTGTGGGTAATTTTAGGTTCGTT
TATAGATTTGCGTTGGGCAAGAATGGAATGTTAGAAATCTAAAGTATTATGTGCTTATAG
TAAAGTTTACTTCAAAGGAACTCATGTGCGCATCTGATGATGGTTTTGCTTCACCGTGGT
GTACACAGCTTGCTGCAGAGACATCATCTCCACACACACACACCCCCACACACACACCCA
CACACCCGGAACTGGAGATAAAAGACAGTATATTTCTTTATTTAAAATGATTACAAAGCT
TTCCTTTCTCACATGTGTCCTC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               78-197, + strand, RNAz p=0.723878

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               78-197, + strand, RNAz p=0.723878

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-501, gnl|bosTau2|chr11 (81189324-81189819)
               

               
               1-501, gnl|Hg17|chr9 (130486239-130486707)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-501, gnl|bosTau2|chr11 (81189324-81189819)
               

               
               1-501, gnl|Hg17|chr9 (130486239-130486707)

	1-501, gnl\|bosTau2\|chr11 (81189324-81189819)
	1-501, gnl\|Hg17\|chr9 (130486239-130486707)