Non-Coding RNA Search

Pig2-87L01

Sequence:


               
               GTGGTGTCCTAGAGTATTTGGAGAAAGAGCTGCGGAACCTCAACCCAGCCCAGCCTCTGC
CTCCTGACCTCCAAGCCAGATCTGGCCATCCCTGCAGCATGCTGTCCTCCCTGGGCTCTG
AGGTCGTGGAACGCAGAATCATCCACCTACCTCCACTGGTCAGAGACCTGTCGTCTTCGT
GGAGGACCAGCAGCTCCTCCCGTCAGCAGTGGGTGCCGCCACCGGCTGCCCCCGCACCCC
GGGATCTGAGGGAGGGGAGGAGGCAGCACCACTACTCTGATTTCCACCTGCAGCCCCGGG
ACCAGGAGTCTAAGCGCTGGGCGTTGGAGCAAAGGGAGCTGGACCAACTGCGGAGTGGAA
GACACCGTGGCCCCAGGCAGCGCGGGTCACCCACCCCCTGGTCAGACAGGGACAGCCTCA
GCGATGGCCACTTGTCCAGCGAGGCCCGCAGCTGCTCCCGCCGTCCCCGGAGCCGCTAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGGTGTCCTAGAGTATTTGGAGAAAGAGCTGCGGAACCTCAACCCAGCCCAGCCTCTGC
CTCCTGACCTCCAAGCCAGATCTGGCCATCCCTGCAGCATGCTGTCCTCCCTGGGCTCTG
AGGTCGTGGAACGCAGAATCATCCACCTACCTCCACTGGTCAGAGACCTGTCGTCTTCGT
GGAGGACCAGCAGCTCCTCCCGTCAGCAGTGGGTGCCGCCACCGGCTGCCCCCGCACCCC
GGGATCTGAGGGAGGGGAGGAGGCAGCACCACTACTCTGATTTCCACCTGCAGCCCCGGG
ACCAGGAGTCTAAGCGCTGGGCGTTGGAGCAAAGGGAGCTGGACCAACTGCGGAGTGGAA
GACACCGTGGCCCCAGGCAGCGCGGGTCACCCACCCCCTGGTCAGACAGGGACAGCCTCA
GCGATGGCCACTTGTCCAGCGAGGCCCGCAGCTGCTCCCGCCGTCCCCGGAGCCGCTAC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               41-197, - strand, RNAz p=0.65396

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               41-197, - strand, RNAz p=0.65396

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               155-303, - strand, RNAmicro p=0.997938

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               155-303, - strand, RNAmicro p=0.997938

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-468, gnl|bosTau2|chr1 (39872711-39873186)
               

               
               2-468, gnl|Hg17|chr3 (123195437-123194974)
               

               
               2-468, gnl|Mm7|chr16 (36430332-36430791)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-468, gnl|bosTau2|chr1 (39872711-39873186)
               

               
               2-468, gnl|Hg17|chr3 (123195437-123194974)
               

               
               2-468, gnl|Mm7|chr16 (36430332-36430791)

	2-468, gnl\|bosTau2\|chr1 (39872711-39873186)
	2-468, gnl\|Hg17\|chr3 (123195437-123194974)
	2-468, gnl\|Mm7\|chr16 (36430332-36430791)