Non-Coding RNA Search

Pig2-88F19

Sequence:


               
               TGGCAGACCCAGCGGCAGAATGTGCTGACAGAGTTCGAGAGGCTGCGCCGACTGCTTGTG
GAGGAAGAGCAACGGCTACTGCAGAGGCTGGAGGAGGAGGAACTGGAGGTACTGCCCCCA
TTGCGGGAGAGTGCAGCCCGCCTCGGACAGCAGAGCGCCCAGCTGGCCGAGCTTATCACT
GAGTTGGAGGGGCGCTGCCAGCTACCAGCGCTGGGGTTACTGCAGGACATCAGGGACACC
CTGCGCAGGGTCCAGGATGTGAAGCTGCACCCTCCTGAGATAGTGCCTATGGAGATGAGG
ACAGTGTGCAGGGTCCCAGGGCTGGTGGAGGCCTTGCGGAGGTTCCGAGGCGACATGACC
CTGGATCCTGACACCGCCAACCCTGAACTGGTCCTATCANAGGACAGGAGGAGCGTGCGG
CGGGGGGACCTGCGGCAGGCCCTGCCTGACAGCCCCGAGCGGTTTGACCCTGGGCCTTGT
GTGCTGGGCCGGGAGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGCAGACCCAGCGGCAGAATGTGCTGACAGAGTTCGAGAGGCTGCGCCGACTGCTTGTG
GAGGAAGAGCAACGGCTACTGCAGAGGCTGGAGGAGGAGGAACTGGAGGTACTGCCCCCA
TTGCGGGAGAGTGCAGCCCGCCTCGGACAGCAGAGCGCCCAGCTGGCCGAGCTTATCACT
GAGTTGGAGGGGCGCTGCCAGCTACCAGCGCTGGGGTTACTGCAGGACATCAGGGACACC
CTGCGCAGGGTCCAGGATGTGAAGCTGCACCCTCCTGAGATAGTGCCTATGGAGATGAGG
ACAGTGTGCAGGGTCCCAGGGCTGGTGGAGGCCTTGCGGAGGTTCCGAGGCGACATGACC
CTGGATCCTGACACCGCCAACCCTGAACTGGTCCTATCANAGGACAGGAGGAGCGTGCGG
CGGGGGGACCTGCGGCAGGCCCTGCCTGACAGCCCCGAGCGGTTTGACCCTGGGCCTTGT
GTGCTGGGCCGGGAGCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               84-203, + strand, RNAz p=0.537684

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               84-203, + strand, RNAz p=0.537684

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               5-237, gnl|bosTau2|chr7 (921696-921464)
               

               
               5-237, gnl|Hg17|chr1 (224895620-224895391)
               

               
               5-237, gnl|Mm7|chr11 (59063548-59063778)
               


               
               348-497, gnl|bosTau2|chr7 (918899-918750)
               

               
               348-497, gnl|Hg17|chr1 (224889690-224889541)
               

               
               348-497, gnl|Mm7|chr11 (59071730-59071879)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-237, gnl|bosTau2|chr7 (921696-921464)
               

               
               5-237, gnl|Hg17|chr1 (224895620-224895391)
               

               
               5-237, gnl|Mm7|chr11 (59063548-59063778)
               


               
               348-497, gnl|bosTau2|chr7 (918899-918750)
               

               
               348-497, gnl|Hg17|chr1 (224889690-224889541)
               

               
               348-497, gnl|Mm7|chr11 (59071730-59071879)

	5-237, gnl\|bosTau2\|chr7 (921696-921464)
	5-237, gnl\|Hg17\|chr1 (224895620-224895391)
	5-237, gnl\|Mm7\|chr11 (59063548-59063778)

	348-497, gnl\|bosTau2\|chr7 (918899-918750)
	348-497, gnl\|Hg17\|chr1 (224889690-224889541)
	348-497, gnl\|Mm7\|chr11 (59071730-59071879)