Non-Coding RNA Search

Pig2-89L14

Sequence:


               
               GGATGTCTTCGACTTCCCAGCACGGGAGGTTTTCACTGCTGAACCAGAGTTTGACGCTGC
TCTGGGCCGGTACCTGTGCTCTATCACGATGCTCAGGCTGACAGACAAGCAACTGAAGCA
CCTGAACATGAGGAGGACGGCACTGCTGGTCACCGCCTCCATCCTGGGCAGCCCCTCCTC
CGGAGAGCAGATTGGGGCTGAGGTCCCCTTCAGCCCAGGGCTCTATGCTGACCAAGCTGA
AATCCTTTTGAGCAACCACTTCACCAGCTCCGAGGTCAAGGTCTTTGGTGCCATGGAGGT
TTTGGAGAACCTGGAGGTGAAATCGGGGTCCCCTGCAGTGCTGGCCTTCGTGAAGGAGAA
GTCTCTGGGGCTGCCCAGCTTCATCACCTACACAGTTGGTGTCTCGGACCCCGCAGCTGG
CAGCCAGGGGCCTCTGTCCACCACCCTGACCTTCTCCAGCCCCACCACTAACCAGGCCAT
CACCATCCCAGTCACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGATGTCTTCGACTTCCCAGCACGGGAGGTTTTCACTGCTGAACCAGAGTTTGACGCTGC
TCTGGGCCGGTACCTGTGCTCTATCACGATGCTCAGGCTGACAGACAAGCAACTGAAGCA
CCTGAACATGAGGAGGACGGCACTGCTGGTCACCGCCTCCATCCTGGGCAGCCCCTCCTC
CGGAGAGCAGATTGGGGCTGAGGTCCCCTTCAGCCCAGGGCTCTATGCTGACCAAGCTGA
AATCCTTTTGAGCAACCACTTCACCAGCTCCGAGGTCAAGGTCTTTGGTGCCATGGAGGT
TTTGGAGAACCTGGAGGTGAAATCGGGGTCCCCTGCAGTGCTGGCCTTCGTGAAGGAGAA
GTCTCTGGGGCTGCCCAGCTTCATCACCTACACAGTTGGTGTCTCGGACCCCGCAGCTGG
CAGCCAGGGGCCTCTGTCCACCACCCTGACCTTCTCCAGCCCCACCACTAACCAGGCCAT
CACCATCCCAGTCACT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               129-248, - strand, RNAz p=0.747826

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               129-248, - strand, RNAz p=0.747826

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               52-320, gnl|bosTau2|chr22 (46695999-46695728)
               

               
               52-320, gnl|Hg17|chr3 (13338349-13338081)
               

               
               52-320, gnl|Mm7|chr6 (91101330-91101059)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               52-320, gnl|bosTau2|chr22 (46695999-46695728)
               

               
               52-320, gnl|Hg17|chr3 (13338349-13338081)
               

               
               52-320, gnl|Mm7|chr6 (91101330-91101059)

	52-320, gnl\|bosTau2\|chr22 (46695999-46695728)
	52-320, gnl\|Hg17\|chr3 (13338349-13338081)
	52-320, gnl\|Mm7\|chr6 (91101330-91101059)