Pig2-89P08
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GCCGGAGAGAGGAGCCCCCGACTAGAGCCCAGAGACATGTCCGACCCAGAGATGGCCTGG
GTGCCCGAGCCCCCAGCCATGACACTGGGGGCCTCGAGAGTGGAGCTGCGGGTGTCCTGC
CACGGCCTCCTCGACCGAGACACACTCACCAAGCCCCACCCCTGTGTGCTGCTCAAGCTC
CACTCCGATGAGCAGTGGGTGGAGGTGGAGCGCACAGAGGTGCTGCGCTCCTGCTCCAGC
CCCGTCTTCTCCCGCGTACTGGCCCTGGAGTACTTCTTCGAGGAGAAGCAGCCCCTGCAG
TTCCATGTGTTTGACGCCGAGGACGGATCCACCAGTCCCCGCAACGACACCTTCCTCGGC
TCCACCGAGTGCACCCTGGGGCAGATCGTGTCACAAACCAAGGTCACTAAGCCTCTGCTA
CTGAAGAATGGGAAGAACGCGGGCAAGTCCACCATCACGATTGTGGCCGAAGAGGTGTCT
GGCACCAATGACTACGTGCAG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GCCGGAGAGAGGAGCCCCCGACTAGAGCCCAGAGACATGTCCGACCCAGAGATGGCCTGG
GTGCCCGAGCCCCCAGCCATGACACTGGGGGCCTCGAGAGTGGAGCTGCGGGTGTCCTGC
CACGGCCTCCTCGACCGAGACACACTCACCAAGCCCCACCCCTGTGTGCTGCTCAAGCTC
CACTCCGATGAGCAGTGGGTGGAGGTGGAGCGCACAGAGGTGCTGCGCTCCTGCTCCAGC
CCCGTCTTCTCCCGCGTACTGGCCCTGGAGTACTTCTTCGAGGAGAAGCAGCCCCTGCAG
TTCCATGTGTTTGACGCCGAGGACGGATCCACCAGTCCCCGCAACGACACCTTCCTCGGC
TCCACCGAGTGCACCCTGGGGCAGATCGTGTCACAAACCAAGGTCACTAAGCCTCTGCTA
CTGAAGAATGGGAAGAACGCGGGCAAGTCCACCATCACGATTGTGGCCGAAGAGGTGTCT
GGCACCAATGACTACGTGCAG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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30-207, gnl|bosTau2|chr10 (12426170-12425993) |
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30-207, gnl|Hg17|chr14 (23611979-23612156) |
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30-207, gnl|Mm7|chr14 (50378847-50379024) |
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243-387, gnl|bosTau2|chr10 (12425198-12425054) |
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243-387, gnl|canFam2|chr8 (7086008-7086167) |
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243-387, gnl|danRer3|chr11 (26399991-26400144) |
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243-387, gnl|dasNov1|scaffold_25033 (285-121) |
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243-387, gnl|echTel1|scaffold_315536 (2658-2806) |
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243-387, gnl|fr1|chrUn (262732407-262732252) |
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243-387, gnl|hg17|chr14 (23612584-23612750) |
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243-387, gnl|Hg17|chr14 (23612587-23612730) |
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243-387, gnl|loxAfr1|scaffold_38726 (15873-15717) |
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243-387, gnl|mm7|chr14 (50379487-50379648) |
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243-387, gnl|Mm7|chr14 (50379490-50379633) |
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243-387, gnl|monDom2|scaffold_12 (25695240-25695084) |
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243-387, gnl|oryCun1|scaffold_211218 (29335-29496) |
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243-387, gnl|panTro1|chr15 (22513019-22513185) |
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243-387, gnl|rheMac2|chr7 (86963289-86963455) |
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243-387, gnl|rn3|chr15 (33659309-33659470) |
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243-387, gnl|tetNig1|chr5 (6056167-6056003) |
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243-387, gnl|xenTro1|scaffold_35 (2882223-2882074) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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30-207, gnl|bosTau2|chr10 (12426170-12425993) |
|
30-207, gnl|Hg17|chr14 (23611979-23612156) |
|
30-207, gnl|Mm7|chr14 (50378847-50379024) |
| |
|
243-387, gnl|bosTau2|chr10 (12425198-12425054) |
|
243-387, gnl|canFam2|chr8 (7086008-7086167) |
|
243-387, gnl|danRer3|chr11 (26399991-26400144) |
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243-387, gnl|dasNov1|scaffold_25033 (285-121) |
|
243-387, gnl|echTel1|scaffold_315536 (2658-2806) |
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243-387, gnl|fr1|chrUn (262732407-262732252) |
|
243-387, gnl|hg17|chr14 (23612584-23612750) |
|
243-387, gnl|Hg17|chr14 (23612587-23612730) |
|
243-387, gnl|loxAfr1|scaffold_38726 (15873-15717) |
|
243-387, gnl|mm7|chr14 (50379487-50379648) |
|
243-387, gnl|Mm7|chr14 (50379490-50379633) |
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243-387, gnl|monDom2|scaffold_12 (25695240-25695084) |
|
243-387, gnl|oryCun1|scaffold_211218 (29335-29496) |
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243-387, gnl|panTro1|chr15 (22513019-22513185) |
|
243-387, gnl|rheMac2|chr7 (86963289-86963455) |
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243-387, gnl|rn3|chr15 (33659309-33659470) |
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243-387, gnl|tetNig1|chr5 (6056167-6056003) |
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243-387, gnl|xenTro1|scaffold_35 (2882223-2882074) |
