Non-Coding RNA Search

Pig2-90G23

Sequence:


               
               GAACTTTCTGAGAGAGGCTTATCCCGGGTCGGAAGCCTGGATCCCCGCCCAGCGGGTGGG
CACAATGCGGCTGGGCTCCGGGACCTTCGCCGCCTGCTGCGTAAGGATCGAGGTGCTCGG
GCTCGCGCTCTTCCTTCGGGGATTCTTCCCGGCTCCTGTTTCTTCGTCTTCTGGCACGGA
GCGGCAAGTAGAGCACCCAGCGCCCGAACCCTCGACTGGTACGGATCACTCCCCGGGCGT
CTCTGCTCCCCAGGCCCCACTTTCCCCGGAGAAGCGTCCTGATGAGCCTTGCCTCTAGGA
CGTCTTCTCGGGGCTCTGGGCTGGTCTCTTCCATTCTGGTTCCCACCCCCCTATTTTCCC
TTCTTACTGCTCCAGCTTCCTTTTCTGTGTCTTAGAACTTTGTGGCAAACACCAGTACCG
GCCCTACTGAGATCCTCCTCCCCGGTCACCACCAAGTAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAACTTTCTGAGAGAGGCTTATCCCGGGTCGGAAGCCTGGATCCCCGCCCAGCGGGTGGG
CACAATGCGGCTGGGCTCCGGGACCTTCGCCGCCTGCTGCGTAAGGATCGAGGTGCTCGG
GCTCGCGCTCTTCCTTCGGGGATTCTTCCCGGCTCCTGTTTCTTCGTCTTCTGGCACGGA
GCGGCAAGTAGAGCACCCAGCGCCCGAACCCTCGACTGGTACGGATCACTCCCCGGGCGT
CTCTGCTCCCCAGGCCCCACTTTCCCCGGAGAAGCGTCCTGATGAGCCTTGCCTCTAGGA
CGTCTTCTCGGGGCTCTGGGCTGGTCTCTTCCATTCTGGTTCCCACCCCCCTATTTTCCC
TTCTTACTGCTCCAGCTTCCTTTTCTGTGTCTTAGAACTTTGTGGCAAACACCAGTACCG
GCCCTACTGAGATCCTCCTCCCCGGTCACCACCAAGTAAG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               226-343, - strand, RNAz p=0.746085

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               226-343, - strand, RNAz p=0.746085

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               173-284, - strand, RNAmicro p=0.957566

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               173-284, - strand, RNAmicro p=0.957566

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               31-460, gnl|bosTau2|chr6 (63673179-63673596)
               

               
               31-460, gnl|Hg17|chr4 (483096-483519)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               31-460, gnl|bosTau2|chr6 (63673179-63673596)
               

               
               31-460, gnl|Hg17|chr4 (483096-483519)

	31-460, gnl\|bosTau2\|chr6 (63673179-63673596)
	31-460, gnl\|Hg17\|chr4 (483096-483519)