Pig2-90K16
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGAAAACAAACCTTTGGCTACTACTCAACCTGCAAAGACTTCAACAGCGAAAGCCAAAA CCCAGCCCACTTCTCTCCCTAAGCAGCCAGCTCCCACCACCTTTGGTGGGTCGAATAAAA AACCCATGAGCCTTGCTTCAGGCTCAGTACCAGCTGCCCCACCCAAACGCCCTGCTGCCG TCACTGCCAGGCCTTCCACCTTACCTTCAAAAGATGCAAAGCCCAAGCCTGTTGGAGAGG CAAAGATCCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCCTCACCATCCAAGCCAGCCT CTGCCCCGGCCATCAGGCCTGGCTCCAAGAGCACCCAGACTGTACCAAAAGCCACAGCAC CTGCCACTCTTGCCTCAGCTGGGCCAAGCAGTAGGAGCCCCTCCACATCCCTGCCCAAGA GGCCCACTGCCAGCAAGACTGAGGGGAAACCTTCAGACGTCAAGAAGTTGGCTACAAAGT CTGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGAAAACAAACCTTTGGCTACTACTCAACCTGCAAAGACTTCAACAGCGAAAGCCAAAA CCCAGCCCACTTCTCTCCCTAAGCAGCCAGCTCCCACCACCTTTGGTGGGTCGAATAAAA AACCCATGAGCCTTGCTTCAGGCTCAGTACCAGCTGCCCCACCCAAACGCCCTGCTGCCG TCACTGCCAGGCCTTCCACCTTACCTTCAAAAGATGCAAAGCCCAAGCCTGTTGGAGAGG CAAAGATCCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCCTCACCATCCAAGCCAGCCT CTGCCCCGGCCATCAGGCCTGGCTCCAAGAGCACCCAGACTGTACCAAAAGCCACAGCAC CTGCCACTCTTGCCTCAGCTGGGCCAAGCAGTAGGAGCCCCTCCACATCCCTGCCCAAGA GGCCCACTGCCAGCAAGACTGAGGGGAAACCTTCAGACGTCAAGAAGTTGGCTACAAAGT CTGCA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 9-429, - strand, RNAz p=0.984594 | |
| 49-227, - strand, RNAz p=0.991806 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 9-429, - strand, RNAz p=0.984594 | |
| 49-227, - strand, RNAz p=0.991806 |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 9-227, gnl|bosTau2|chr22 (40670449-40670231) | |
| 9-227, gnl|canFam2|chr20 (44079322-44079095) | |
| 9-227, gnl|dasNov1|scaffold_16826 (45822-46049) | |
| 9-227, gnl|echTel1|scaffold_183143 (1658-1886) | |
| 9-227, gnl|galGal2|chr2 (281237-281013) | |
| 9-227, gnl|hg17|chr3 (47892175-47892402) | |
| 9-227, gnl|Hg17|chr3 (47892397-47892179) | |
| 9-227, gnl|loxAfr1|scaffold_8619 (77163-77390) | |
| 9-227, gnl|mm7|chr9 (109761313-109761080) | |
| 9-227, gnl|Mm7|chr9 (109761083-109761307) | |
| 9-227, gnl|monDom2|scaffold_5 (82871833-82872066) | |
| 9-227, gnl|oryCun1|scaffold_182706 (45977-45750) | |
| 9-227, gnl|panTro1|chr2 (49369932-49370159) | |
| 9-227, gnl|rheMac2|chr2 (88636156-88635929) | |
| 9-227, gnl|rn3|chr8 (114438345-114438112) | |
| 9-227, gnl|xenTro1|scaffold_647 (61504-61283) | |
| 273-429, gnl|bosTau2|chr22 (40667197-40667041) | |
| 273-429, gnl|canFam2|chr20 (44083106-44082909) | |
| 273-429, gnl|echTel1|scaffold_318843 (50563-50757) | |
| 273-429, gnl|hg17|chr3 (47888400-47888594) | |
| 273-429, gnl|Hg17|chr3 (47888567-47888411) | |
| 273-429, gnl|mm7|chr9 (109764540-109764346) | |
| 273-429, gnl|Mm7|chr9 (109764371-109764527) | |
| 273-429, gnl|monDom2|scaffold_5 (82865843-82866035) | |
| 273-429, gnl|panTro1|chr2 (49366150-49366344) | |
| 273-429, gnl|rheMac2|chr2 (88641134-88640940) | |
| 273-429, gnl|rn3|chr8 (114441740-114441546) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 9-227, gnl|bosTau2|chr22 (40670449-40670231) | |
| 9-227, gnl|canFam2|chr20 (44079322-44079095) | |
| 9-227, gnl|dasNov1|scaffold_16826 (45822-46049) | |
| 9-227, gnl|echTel1|scaffold_183143 (1658-1886) | |
| 9-227, gnl|galGal2|chr2 (281237-281013) | |
| 9-227, gnl|hg17|chr3 (47892175-47892402) | |
| 9-227, gnl|Hg17|chr3 (47892397-47892179) | |
| 9-227, gnl|loxAfr1|scaffold_8619 (77163-77390) | |
| 9-227, gnl|mm7|chr9 (109761313-109761080) | |
| 9-227, gnl|Mm7|chr9 (109761083-109761307) | |
| 9-227, gnl|monDom2|scaffold_5 (82871833-82872066) | |
| 9-227, gnl|oryCun1|scaffold_182706 (45977-45750) | |
| 9-227, gnl|panTro1|chr2 (49369932-49370159) | |
| 9-227, gnl|rheMac2|chr2 (88636156-88635929) | |
| 9-227, gnl|rn3|chr8 (114438345-114438112) | |
| 9-227, gnl|xenTro1|scaffold_647 (61504-61283) | |
| 273-429, gnl|bosTau2|chr22 (40667197-40667041) | |
| 273-429, gnl|canFam2|chr20 (44083106-44082909) | |
| 273-429, gnl|echTel1|scaffold_318843 (50563-50757) | |
| 273-429, gnl|hg17|chr3 (47888400-47888594) | |
| 273-429, gnl|Hg17|chr3 (47888567-47888411) | |
| 273-429, gnl|mm7|chr9 (109764540-109764346) | |
| 273-429, gnl|Mm7|chr9 (109764371-109764527) | |
| 273-429, gnl|monDom2|scaffold_5 (82865843-82866035) | |
| 273-429, gnl|panTro1|chr2 (49366150-49366344) | |
| 273-429, gnl|rheMac2|chr2 (88641134-88640940) | |
| 273-429, gnl|rn3|chr8 (114441740-114441546) |