Pig2-91K04
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGAGAAAGGGAAGGGGAGGTGAGGGAGGCATCTCAACTTCAGCATTGATGTCCACGAGC TTCCAGGGGCCACTTGCCTTCCGGCCAGGGGCTTTGCGCGACTTGCCAAGATGACAGAGG GGACCAAGAAGGCCAGCAAGAAGTTCAAGTTCTTCAAGTTCAAAGGCTGTGGGAGTCTCT CCAACCTTCCTCGGTCCTTCACACTGAGACGATCTTTGGCCCCCAACAATATCCAGCCCC CTCTGGAGCCTCACACCTTTGATGCCACGCAGGATGACATGGTGACAGTCCCCAAGAGCC CCCCGGCCTATGCTCGCTCCAGTGACATGTACAGCCACATGGGCACCATGCCTCGCCCAG CAATCAAGAAGGCTCGGGACCAAAAGGCCACCCGGGAGGCCCGGGAGGCTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGAGAAAGGGAAGGGGAGGTGAGGGAGGCATCTCAACTTCAGCATTGATGTCCACGAGC TTCCAGGGGCCACTTGCCTTCCGGCCAGGGGCTTTGCGCGACTTGCCAAGATGACAGAGG GGACCAAGAAGGCCAGCAAGAAGTTCAAGTTCTTCAAGTTCAAAGGCTGTGGGAGTCTCT CCAACCTTCCTCGGTCCTTCACACTGAGACGATCTTTGGCCCCCAACAATATCCAGCCCC CTCTGGAGCCTCACACCTTTGATGCCACGCAGGATGACATGGTGACAGTCCCCAAGAGCC CCCCGGCCTATGCTCGCTCCAGTGACATGTACAGCCACATGGGCACCATGCCTCGCCCAG CAATCAAGAAGGCTCGGGACCAAAAGGCCACCCGGGAGGCCCGGGAGGCTGG |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 148-247, + strand, RNAz p=0.82047 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 148-247, + strand, RNAz p=0.82047 |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 3-147, gnl|bosTau2|chr11 (77306077-77305939) | |
| 3-147, gnl|canFam2|chr9 (58970820-58970682) | |
| 3-147, gnl|dasNov1|scaffold_178026 (1425-1580) | |
| 3-147, gnl|echTel1|scaffold_296194 (3157-2993) | |
| 3-147, gnl|hg17|chr9 (127620385-127620536) | |
| 3-147, gnl|Hg17|chr9 (127620562-127620424) | |
| 3-147, gnl|loxAfr1|scaffold_207520 (698-859) | |
| 3-147, gnl|mm7|chr2 (32728544-32728395) | |
| 3-147, gnl|Mm7|chr2 (32728368-32728506) | |
| 3-147, gnl|monDom2|scaffold_51 (2168275-2168438) | |
| 3-147, gnl|oryCun1|scaffold_139841 (6920-7098) | |
| 3-147, gnl|panTro1|chr11 (112438513-112438664) | |
| 3-147, gnl|rheMac2|chr15 (98801559-98801408) | |
| 3-147, gnl|rn3|chr3 (11583555-11583415) | |
| 148-412, gnl|bosTau2|chr11 (77303519-77303255) | |
| 148-412, gnl|canFam2|chr9 (58973264-58973005) | |
| 148-412, gnl|echTel1|scaffold_296194 (5220-4967) | |
| 148-412, gnl|galGal2|chr17 (5831600-5831906) | |
| 148-412, gnl|hg17|chr9 (127615979-127616238) | |
| 148-412, gnl|Hg17|chr9 (127616300-127616036) | |
| 148-412, gnl|loxAfr1|scaffold_39070 (11488-11747) | |
| 148-412, gnl|mm7|chr2 (32732571-32732312) | |
| 148-412, gnl|Mm7|chr2 (32732248-32732512) | |
| 148-412, gnl|panTro1|chr11 (112433285-112433544) | |
| 148-412, gnl|rheMac2|chr15 (98805618-98805359) | |
| 148-412, gnl|rn3|chr3 (11596694-11596435) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-147, gnl|bosTau2|chr11 (77306077-77305939) | |
| 3-147, gnl|canFam2|chr9 (58970820-58970682) | |
| 3-147, gnl|dasNov1|scaffold_178026 (1425-1580) | |
| 3-147, gnl|echTel1|scaffold_296194 (3157-2993) | |
| 3-147, gnl|hg17|chr9 (127620385-127620536) | |
| 3-147, gnl|Hg17|chr9 (127620562-127620424) | |
| 3-147, gnl|loxAfr1|scaffold_207520 (698-859) | |
| 3-147, gnl|mm7|chr2 (32728544-32728395) | |
| 3-147, gnl|Mm7|chr2 (32728368-32728506) | |
| 3-147, gnl|monDom2|scaffold_51 (2168275-2168438) | |
| 3-147, gnl|oryCun1|scaffold_139841 (6920-7098) | |
| 3-147, gnl|panTro1|chr11 (112438513-112438664) | |
| 3-147, gnl|rheMac2|chr15 (98801559-98801408) | |
| 3-147, gnl|rn3|chr3 (11583555-11583415) | |
| 148-412, gnl|bosTau2|chr11 (77303519-77303255) | |
| 148-412, gnl|canFam2|chr9 (58973264-58973005) | |
| 148-412, gnl|echTel1|scaffold_296194 (5220-4967) | |
| 148-412, gnl|galGal2|chr17 (5831600-5831906) | |
| 148-412, gnl|hg17|chr9 (127615979-127616238) | |
| 148-412, gnl|Hg17|chr9 (127616300-127616036) | |
| 148-412, gnl|loxAfr1|scaffold_39070 (11488-11747) | |
| 148-412, gnl|mm7|chr2 (32732571-32732312) | |
| 148-412, gnl|Mm7|chr2 (32732248-32732512) | |
| 148-412, gnl|panTro1|chr11 (112433285-112433544) | |
| 148-412, gnl|rheMac2|chr15 (98805618-98805359) | |
| 148-412, gnl|rn3|chr3 (11596694-11596435) |