Non-Coding RNA Search

Pig2-93C18

Sequence:


               
               TGGAACACCCTCTTCCTGCATGGGGAGAGCCGTCCCTCTCCTTCTCCACCTGCCCTCTAA
AAAAGGCCCTCTTTCTCTTGGCTTTGGGGGCACCTGGCTACTGGGGGCGTTCCCCTTCTT
CTGCCTGGAGATGGTGTAAATCCCAGCGGACTTTCTCCCTTGCTCAGAGTGCTGGGGTGT
GCAGTGGCAGCCACTGGGGTCGAGGAGGGGGCCAGAGACCCCTGAGACCCAGAGGGACCC
CTTCCTCAGCTGGGAGTGGATGGCCTCACGCCGAGGGGTCCCGGCGTGGAACTGGAAGCG
AGGGCGTTCCCACAGGGCCCTGGTACCCCACCTGGCTGCGCGCTTGCTCGCTCACTCTGC
CGGGGCGCCGCCACTGCACTGTGCCTGCGTGTCATCTGGACCCTGGCTTCCCTGCGCCCC
CCCACCTCGCGGCCCCGCCCCCGGCACTGTTGGCTCCTCACCTCACCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGAACACCCTCTTCCTGCATGGGGAGAGCCGTCCCTCTCCTTCTCCACCTGCCCTCTAA
AAAAGGCCCTCTTTCTCTTGGCTTTGGGGGCACCTGGCTACTGGGGGCGTTCCCCTTCTT
CTGCCTGGAGATGGTGTAAATCCCAGCGGACTTTCTCCCTTGCTCAGAGTGCTGGGGTGT
GCAGTGGCAGCCACTGGGGTCGAGGAGGGGGCCAGAGACCCCTGAGACCCAGAGGGACCC
CTTCCTCAGCTGGGAGTGGATGGCCTCACGCCGAGGGGTCCCGGCGTGGAACTGGAAGCG
AGGGCGTTCCCACAGGGCCCTGGTACCCCACCTGGCTGCGCGCTTGCTCGCTCACTCTGC
CGGGGCGCCGCCACTGCACTGTGCCTGCGTGTCATCTGGACCCTGGCTTCCCTGCGCCCC
CCCACCTCGCGGCCCCGCCCCCGGCACTGTTGGCTCCTCACCTCACCGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               138-294, + strand, RNAz p=0.995686

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               138-294, + strand, RNAz p=0.995686

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of NM_014759, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of NM_014759, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-469, gnl|bosTau2|chr8 (31336488-31336957)
               

               
               1-469, gnl|Hg17|chr8 (22134235-22133774)
               

               
               1-469, gnl|Mm7|chr14 (65112331-65112778)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-469, gnl|bosTau2|chr8 (31336488-31336957)
               

               
               1-469, gnl|Hg17|chr8 (22134235-22133774)
               

               
               1-469, gnl|Mm7|chr14 (65112331-65112778)

	1-469, gnl\|bosTau2\|chr8 (31336488-31336957)
	1-469, gnl\|Hg17\|chr8 (22134235-22133774)
	1-469, gnl\|Mm7\|chr14 (65112331-65112778)