Non-Coding RNA Search

Pig2-93F13

Sequence:


               
               TAGATCGCGAGCACCCTCATCATGACCAACCCCCAGAGGAGGGTGTGTTTGGGGAGACAG
TGTATAGAGGAACCCTGAGCCCTCTGGGGGCATCTTGGGAGCAGGGTCCTCAGGAGTCCA
GTGGTGAGGACAGGAACAATTCTTGGGAATGGGAACATCTCCAGAATTTCGGGCAGGATG
GGGCTGGAGTGCCCCTCAATGTGTCTTACCCAGCATGCCTTTGTTGGAGTCAGACAGGCA
CATGTCCTTCTCAGCACTGGGCAGCACGAAACCCACCACAAAGACCTCGACACCATCAGC
CATCAGCGCCAGACCAAGCACGAAATAGAGTGTCCACTGGAAGCGGCCATGGCCACACTC
CCGTAGGATAGTTTCATACTGCTGAGCTAGTTCTTCCCGTTCTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGATCGCGAGCACCCTCATCATGACCAACCCCCAGAGGAGGGTGTGTTTGGGGAGACAG
TGTATAGAGGAACCCTGAGCCCTCTGGGGGCATCTTGGGAGCAGGGTCCTCAGGAGTCCA
GTGGTGAGGACAGGAACAATTCTTGGGAATGGGAACATCTCCAGAATTTCGGGCAGGATG
GGGCTGGAGTGCCCCTCAATGTGTCTTACCCAGCATGCCTTTGTTGGAGTCAGACAGGCA
CATGTCCTTCTCAGCACTGGGCAGCACGAAACCCACCACAAAGACCTCGACACCATCAGC
CATCAGCGCCAGACCAAGCACGAAATAGAGTGTCCACTGGAAGCGGCCATGGCCACACTC
CCGTAGGATAGTTTCATACTGCTGAGCTAGTTCTTCCCGTTCTTT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               34-151, + strand, RNAz p=0.974992

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               34-151, + strand, RNAz p=0.974992

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               34-405, gnl|bosTau2|chr3 (17567837-17567466)
               

               
               34-405, gnl|Hg17|chr1 (146697688-146698039)
               

               
               34-405, gnl|Mm7|chr3 (96059707-96059362)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               34-405, gnl|bosTau2|chr3 (17567837-17567466)
               

               
               34-405, gnl|Hg17|chr1 (146697688-146698039)
               

               
               34-405, gnl|Mm7|chr3 (96059707-96059362)

	34-405, gnl\|bosTau2\|chr3 (17567837-17567466)
	34-405, gnl\|Hg17\|chr1 (146697688-146698039)
	34-405, gnl\|Mm7\|chr3 (96059707-96059362)