Non-Coding RNA Search

Pig2-94A09

Sequence:


               
               TTCAGGAGTGCTTCTAGCTGGCTTCTGCACAAGCTGGTGAGGACCTGCTGGAGTTGCTGC
CCAAGCATGCCAGGCCGGGGGCCAGGCCGTGCAAGGCCCCACACACCCTGTGGGTTTCTC
TGACCAAGGAGTCTTTGGAGGAGACTTGCCGATGGGATTCCGCACAGGATATGTGTGTGT
GTGTGTGTGTGTGTGTGAAAACATTCAGAAGATTTGCTGTGGCTGCCTCTTCCCAGCAGG
GCACTGCTCAAGGGCAGAGCTGGGCCGTGTCTGTACCCAGAGAGGCTAAGGGCAGGGCCT
GGCCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCAGGAGTGCTTCTAGCTGGCTTCTGCACAAGCTGGTGAGGACCTGCTGGAGTTGCTGC
CCAAGCATGCCAGGCCGGGGGCCAGGCCGTGCAAGGCCCCACACACCCTGTGGGTTTCTC
TGACCAAGGAGTCTTTGGAGGAGACTTGCCGATGGGATTCCGCACAGGATATGTGTGTGT
GTGTGTGTGTGTGTGTGAAAACATTCAGAAGATTTGCTGTGGCTGCCTCTTCCCAGCAGG
GCACTGCTCAAGGGCAGAGCTGGGCCGTGTCTGTACCCAGAGAGGCTAAGGGCAGGGCCT
GGCCG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               74-175, - strand, RNAz p=0.569077

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               74-175, - strand, RNAz p=0.569077

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-175, gnl|bosTau2|chr22 (38050051-38050222)
               

               
               1-175, gnl|Hg17|chr3 (49681612-49681802)
               

               
               1-175, gnl|Mm7|chr9 (107827775-107827593)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-175, gnl|bosTau2|chr22 (38050051-38050222)
               

               
               1-175, gnl|Hg17|chr3 (49681612-49681802)
               

               
               1-175, gnl|Mm7|chr9 (107827775-107827593)

	1-175, gnl\|bosTau2\|chr22 (38050051-38050222)
	1-175, gnl\|Hg17\|chr3 (49681612-49681802)
	1-175, gnl\|Mm7\|chr9 (107827775-107827593)