Non-Coding RNA Search

Pig2-94F12

Sequence:


               
               GAAAGGACTAACTCGAAATTTGCAGAAGAAGCACAATTCCTCCTCAAAGACTGTAGTAAT
CCATGAGGTAACTTCAGAAACCACAACCCAGGTCATCATCGCAGGCTGTGTGAACGAAGT
AAAAGAGATCTATGACTTGCTTTTTGCCTTTGTGGAAAAACACACAAAAATAGAGAAACT
GATTGAAGTAAAGCCTTCCTTGGTTATTGATTTTTTAAGGACAGAAAAGTCATTCTTGCA
AAAGATCAAGAAGATGAATGTGCAGGTAGTTTTCAATCCCGAGGACAAGCAAAAAGGCAT
CTTACTAACTGGCCCAAAGACCGAAGTCCTGGAGGCAAAGAACATTGTCATGCAAGCCTG
GAATTCAGTCTGTGTTAAGAGTCTCCAGATTGATAAGCCAGGAGCCCGCCAGTTCTTCCA
GGATAAATCACGGTATTATAAAAGTGAGGTCAAAAGGTTATTTGGTTGTGTTATTGAGCT
ACAGAAGGATGAAGAAAAGGAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAAGGACTAACTCGAAATTTGCAGAAGAAGCACAATTCCTCCTCAAAGACTGTAGTAAT
CCATGAGGTAACTTCAGAAACCACAACCCAGGTCATCATCGCAGGCTGTGTGAACGAAGT
AAAAGAGATCTATGACTTGCTTTTTGCCTTTGTGGAAAAACACACAAAAATAGAGAAACT
GATTGAAGTAAAGCCTTCCTTGGTTATTGATTTTTTAAGGACAGAAAAGTCATTCTTGCA
AAAGATCAAGAAGATGAATGTGCAGGTAGTTTTCAATCCCGAGGACAAGCAAAAAGGCAT
CTTACTAACTGGCCCAAAGACCGAAGTCCTGGAGGCAAAGAACATTGTCATGCAAGCCTG
GAATTCAGTCTGTGTTAAGAGTCTCCAGATTGATAAGCCAGGAGCCCGCCAGTTCTTCCA
GGATAAATCACGGTATTATAAAAGTGAGGTCAAAAGGTTATTTGGTTGTGTTATTGAGCT
ACAGAAGGATGAAGAAAAGGAGG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               317-436, + strand, RNAz p=0.99845

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               317-436, + strand, RNAz p=0.99845

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of AY134858, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of AY134858, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-503, gnl|bosTau2|chr1 (39266106-39265604)
               

               
               1-503, gnl|Hg17|chr3 (123901933-123902441)
               

               
               1-503, gnl|Mm7|chr16 (35531970-35531427)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-503, gnl|bosTau2|chr1 (39266106-39265604)
               

               
               1-503, gnl|Hg17|chr3 (123901933-123902441)
               

               
               1-503, gnl|Mm7|chr16 (35531970-35531427)

	1-503, gnl\|bosTau2\|chr1 (39266106-39265604)
	1-503, gnl\|Hg17\|chr3 (123901933-123902441)
	1-503, gnl\|Mm7\|chr16 (35531970-35531427)