Non-Coding RNA Search

Pig2-94P10

Sequence:


               
               CAACCTCAATCAGAAAAGCCAAGCGCCACAACAACACCTTCCCACTCTTCACCGAAGGAC
TCACACGGAACCGAACTGCCCATGAGAAAGTACTGGCCTTGGAGCAGCAGGTTCTGATGC
TCACCAAGGAGCTAAAGGCTCAGAAGGAGCTGGTGAAGATCCTTCACAAGGCGCTGGAGG
CTGCCCAGCAGGAGAAGAGGGTGTCTGGAGCGTACCTAGCAGCTGAGGACAAGGACCGGC
TGGAGCTAGTGCGGCACAAAGTGCGGCAGATCGCAGAGCTGGGCAAGCGGGTGGAGGCCC
TGGAGCAGGAGCGGGAGAGCCTGTTGCAGATGGCAAGCCTGCGGGAGCAGCAGGTGCAGG
AACTGCAGCAGCATGTGCAGCTGCTCATGGACAAGAACCAAGCCAAGCAGCAGGTCATCT
GCAAGCTCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAACCTCAATCAGAAAAGCCAAGCGCCACAACAACACCTTCCCACTCTTCACCGAAGGAC
TCACACGGAACCGAACTGCCCATGAGAAAGTACTGGCCTTGGAGCAGCAGGTTCTGATGC
TCACCAAGGAGCTAAAGGCTCAGAAGGAGCTGGTGAAGATCCTTCACAAGGCGCTGGAGG
CTGCCCAGCAGGAGAAGAGGGTGTCTGGAGCGTACCTAGCAGCTGAGGACAAGGACCGGC
TGGAGCTAGTGCGGCACAAAGTGCGGCAGATCGCAGAGCTGGGCAAGCGGGTGGAGGCCC
TGGAGCAGGAGCGGGAGAGCCTGTTGCAGATGGCAAGCCTGCGGGAGCAGCAGGTGCAGG
AACTGCAGCAGCATGTGCAGCTGCTCATGGACAAGAACCAAGCCAAGCAGCAGGTCATCT
GCAAGCTCTCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61834955|ref|XP_591577.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61834955|ref|XP_591577.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               314-431, - strand, RNAz p=0.959582

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               314-431, - strand, RNAz p=0.959582

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               145-431, gnl|bosTau2|chr8 (33470528-33470817)
               

               
               145-431, gnl|Hg17|chr9 (98063067-98062778)
               

               
               145-431, gnl|Mm7|chr4 (46634637-46634348)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               145-431, gnl|bosTau2|chr8 (33470528-33470817)
               

               
               145-431, gnl|Hg17|chr9 (98063067-98062778)
               

               
               145-431, gnl|Mm7|chr4 (46634637-46634348)

	145-431, gnl\|bosTau2\|chr8 (33470528-33470817)
	145-431, gnl\|Hg17\|chr9 (98063067-98062778)
	145-431, gnl\|Mm7\|chr4 (46634637-46634348)