Non-Coding RNA Search

Pig2-94P24

Sequence:


               
               ATCCATTTTGCGACGCGCTCCAATCCACAAGTCTAAGTAGTTTGTAACTCACTGGGTGAT
TTAAACACACACACATACTTAGTAAAAATGTCTACTTATGGGTCNTGAAATGCAAGTTAC
GGTGAAAGTTCACAAAGCTGTGAGCTTTATGGGAAAGGGCAGGCATCTGTCTTATACATA
ATTGGAATTCACAATGTAGGATAGTACAGTTGTCATGCATCTGTTAAAGGCCAAAAATTT
ATTAGAGCAAATTAGAAATTACAGACATTCCCTTTGGATAAAGGAGTCCCTCAGTAATAT
GCAACAGCACTTGGAGAAAACTGTTGGAGAAAGAACAATGATGGCAGATCACAGATAGTG
ACAGATCTTTGTGTTTACACATGACGGATATTGTTTGAGAATAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCCATTTTGCGACGCGCTCCAATCCACAAGTCTAAGTAGTTTGTAACTCACTGGGTGAT
TTAAACACACACACATACTTAGTAAAAATGTCTACTTATGGGTCNTGAAATGCAAGTTAC
GGTGAAAGTTCACAAAGCTGTGAGCTTTATGGGAAAGGGCAGGCATCTGTCTTATACATA
ATTGGAATTCACAATGTAGGATAGTACAGTTGTCATGCATCTGTTAAAGGCCAAAAATTT
ATTAGAGCAAATTAGAAATTACAGACATTCCCTTTGGATAAAGGAGTCCCTCAGTAATAT
GCAACAGCACTTGGAGAAAACTGTTGGAGAAAGAACAATGATGGCAGATCACAGATAGTG
ACAGATCTTTGTGTTTACACATGACGGATATTGTTTGAGAATAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               65-222, + strand, RNAz p=0.883477

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               65-222, + strand, RNAz p=0.883477

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               65-402, gnl|bosTau2|chr29 (11332709-11332373)
               

               
               65-402, gnl|Hg17|chr11 (79653616-79653281)
               

               
               65-402, gnl|Mm7|chr7 (91429930-91430263)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               65-402, gnl|bosTau2|chr29 (11332709-11332373)
               

               
               65-402, gnl|Hg17|chr11 (79653616-79653281)
               

               
               65-402, gnl|Mm7|chr7 (91429930-91430263)

	65-402, gnl\|bosTau2\|chr29 (11332709-11332373)
	65-402, gnl\|Hg17\|chr11 (79653616-79653281)
	65-402, gnl\|Mm7\|chr7 (91429930-91430263)