Non-Coding RNA Search

Pig2-95A18

Sequence:


               
               ACAAAATCTTAATATCGAGGGAATCAGAGGATTGTGTTAGTACATCCTTTCATGCCTGCC
ACCCCTTTGATGGATGTTGTTAGCCCAAATTACTTTCATATATATATATAGAAGCTGAAT
AGGCTTTATTGCGTCACCAACACAGGAGGAAGAACCGGGCAACGTACATGTTTGAATGCT
GTGGGTTTGACACCTGTTTGAAAACAACTTATATGAAAAGATTTTTAACCCAGGATTTTT
TTTTTCCCAAAGCAGATCTAAATTGTTTACTACCCAGGGTTGGAAAGGGCAAACACCTCT
AGTCTTTCTCCTCTCATTGCCCTCTACCACATCCCTTTCCACCTTTACGTGGGTCAAGAC
ATTTTCTGAAATGGAAATTCTACTGTTACTCAAACTGCCATTGATTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAAAATCTTAATATCGAGGGAATCAGAGGATTGTGTTAGTACATCCTTTCATGCCTGCC
ACCCCTTTGATGGATGTTGTTAGCCCAAATTACTTTCATATATATATATAGAAGCTGAAT
AGGCTTTATTGCGTCACCAACACAGGAGGAAGAACCGGGCAACGTACATGTTTGAATGCT
GTGGGTTTGACACCTGTTTGAAAACAACTTATATGAAAAGATTTTTAACCCAGGATTTTT
TTTTTCCCAAAGCAGATCTAAATTGTTTACTACCCAGGGTTGGAAAGGGCAAACACCTCT
AGTCTTTCTCCTCTCATTGCCCTCTACCACATCCCTTTCCACCTTTACGTGGGTCAAGAC
ATTTTCTGAAATGGAAATTCTACTGTTACTCAAACTGCCATTGATTA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               255-353, - strand, RNAz p=0.634821

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               255-353, - strand, RNAz p=0.634821

Aligned organism(s): 15 entry(ies)

More info

Aligned organism(s): 15 entry(ies)

Help | Less info


               
               4-407, gnl|bosTau2|chr4 (59731908-59731492)
               

               
               4-407, gnl|canFam2|chr16 (12407234-12406749)
               

               
               4-407, gnl|dasNov1|scaffold_23039 (498-9)
               

               
               4-407, gnl|echTel1|scaffold_283143 (40660-41154)
               

               
               4-407, gnl|galGal2|chr1 (45840980-45841480)
               

               
               4-407, gnl|hg17|chr7 (138442918-138443410)
               

               
               4-407, gnl|Hg17|chr7 (138443033-138443439)
               

               
               4-407, gnl|loxAfr1|scaffold_529 (71374-70887)
               

               
               4-407, gnl|mm7|chr6 (38436853-38437341)
               

               
               4-407, gnl|Mm7|chr6 (38436965-38437370)
               

               
               4-407, gnl|monDom2|scaffold_22 (3006424-3005929)
               

               
               4-407, gnl|oryCun1|scaffold_207273 (25466-24930)
               

               
               4-407, gnl|panTro1|chr6 (141194283-141194775)
               

               
               4-407, gnl|rheMac2|chr3 (176798318-176798810)
               

               
               4-407, gnl|rn3|chr4 (66342727-66343209)

Aligned organism(s): 15 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-407, gnl|bosTau2|chr4 (59731908-59731492)
               

               
               4-407, gnl|canFam2|chr16 (12407234-12406749)
               

               
               4-407, gnl|dasNov1|scaffold_23039 (498-9)
               

               
               4-407, gnl|echTel1|scaffold_283143 (40660-41154)
               

               
               4-407, gnl|galGal2|chr1 (45840980-45841480)
               

               
               4-407, gnl|hg17|chr7 (138442918-138443410)
               

               
               4-407, gnl|Hg17|chr7 (138443033-138443439)
               

               
               4-407, gnl|loxAfr1|scaffold_529 (71374-70887)
               

               
               4-407, gnl|mm7|chr6 (38436853-38437341)
               

               
               4-407, gnl|Mm7|chr6 (38436965-38437370)
               

               
               4-407, gnl|monDom2|scaffold_22 (3006424-3005929)
               

               
               4-407, gnl|oryCun1|scaffold_207273 (25466-24930)
               

               
               4-407, gnl|panTro1|chr6 (141194283-141194775)
               

               
               4-407, gnl|rheMac2|chr3 (176798318-176798810)
               

               
               4-407, gnl|rn3|chr4 (66342727-66343209)

	4-407, gnl\|bosTau2\|chr4 (59731908-59731492)
	4-407, gnl\|canFam2\|chr16 (12407234-12406749)
	4-407, gnl\|dasNov1\|scaffold_23039 (498-9)
	4-407, gnl\|echTel1\|scaffold_283143 (40660-41154)
	4-407, gnl\|galGal2\|chr1 (45840980-45841480)
	4-407, gnl\|hg17\|chr7 (138442918-138443410)
	4-407, gnl\|Hg17\|chr7 (138443033-138443439)
	4-407, gnl\|loxAfr1\|scaffold_529 (71374-70887)
	4-407, gnl\|mm7\|chr6 (38436853-38437341)
	4-407, gnl\|Mm7\|chr6 (38436965-38437370)
	4-407, gnl\|monDom2\|scaffold_22 (3006424-3005929)
	4-407, gnl\|oryCun1\|scaffold_207273 (25466-24930)
	4-407, gnl\|panTro1\|chr6 (141194283-141194775)
	4-407, gnl\|rheMac2\|chr3 (176798318-176798810)
	4-407, gnl\|rn3\|chr4 (66342727-66343209)