Pig2-95J23
|
GGACAACCTTGCCCAGCCTAAGGAAGTCTCCCATCGACACGTGCCCGACAGGGCTCACTA
TTTTTATAGCTGCGGTAGAGAGTCTGTAATCTGGGAGATCCCTCCTCCTGCGCTGCTTTG
CCGACCTTCCAAAAGGATCCAGAAGCTAGCAGAGCCCAACAGATTCAAGACAGGGTATCT
AATAAATAGGCCCTTCAGTGATTACTTGACAAGAGAGTCTCTTCAAATCTCTGGCCCTTC
TCCCCGGATATTACGACTCTCAGTAGCCAAAGGCACCAATCCAAACTATGTTCCTCCAAA
AAGTATTGAAACCAAGATTTCGACATCTGCCCTGAATGCTGTTGCAACTCCAAGAATTGT
AGACCTTGCCCAACCCAGGATTAAGATCGAGGGTCTGTGCTTTGAAAGAGAAAGTAATGA
AATGCCCATCCGTCCGGTATCCCGTGCTGCCCTGCTAGCCAGCGCGAGCCCTCGGACGCT
GGCTCT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGACAACCTTGCCCAGCCTAAGGAAGTCTCCCATCGACACGTGCCCGACAGGGCTCACTA
TTTTTATAGCTGCGGTAGAGAGTCTGTAATCTGGGAGATCCCTCCTCCTGCGCTGCTTTG
CCGACCTTCCAAAAGGATCCAGAAGCTAGCAGAGCCCAACAGATTCAAGACAGGGTATCT
AATAAATAGGCCCTTCAGTGATTACTTGACAAGAGAGTCTCTTCAAATCTCTGGCCCTTC
TCCCCGGATATTACGACTCTCAGTAGCCAAAGGCACCAATCCAAACTATGTTCCTCCAAA
AAGTATTGAAACCAAGATTTCGACATCTGCCCTGAATGCTGTTGCAACTCCAAGAATTGT
AGACCTTGCCCAACCCAGGATTAAGATCGAGGGTCTGTGCTTTGAAAGAGAAAGTAATGA
AATGCCCATCCGTCCGGTATCCCGTGCTGCCCTGCTAGCCAGCGCGAGCCCTCGGACGCT
GGCTCT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
49-190, gnl|bosTau2|chr6 (35246405-35246264) |
|
49-190, gnl|Hg17|chr4 (57282596-57282737) |
|
49-190, gnl|Mm7|chr5 (76986065-76986206) |
| |
|
305-445, gnl|bosTau2|chr6 (35230804-35230664) |
|
305-445, gnl|canFam2|chr13 (51722535-51722846) |
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305-445, gnl|echTel1|scaffold_162836 (3315-3028) |
|
305-445, gnl|hg17|chr4 (57303461-57303773) |
|
305-445, gnl|Hg17|chr4 (57303594-57303734) |
|
305-445, gnl|loxAfr1|scaffold_59501 (6571-6883) |
|
305-445, gnl|mm7|chr5 (76990858-76991149) |
|
305-445, gnl|Mm7|chr5 (76990972-76991112) |
|
305-445, gnl|oryCun1|scaffold_165483 (6960-7246) |
|
305-445, gnl|panTro1|chr3 (89325399-89325096) |
|
305-445, gnl|rheMac2|chr5 (72768253-72767942) |
|
305-445, gnl|rn3|chr14 (33407119-33406828) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
49-190, gnl|bosTau2|chr6 (35246405-35246264) |
|
49-190, gnl|Hg17|chr4 (57282596-57282737) |
|
49-190, gnl|Mm7|chr5 (76986065-76986206) |
| |
|
305-445, gnl|bosTau2|chr6 (35230804-35230664) |
|
305-445, gnl|canFam2|chr13 (51722535-51722846) |
|
305-445, gnl|echTel1|scaffold_162836 (3315-3028) |
|
305-445, gnl|hg17|chr4 (57303461-57303773) |
|
305-445, gnl|Hg17|chr4 (57303594-57303734) |
|
305-445, gnl|loxAfr1|scaffold_59501 (6571-6883) |
|
305-445, gnl|mm7|chr5 (76990858-76991149) |
|
305-445, gnl|Mm7|chr5 (76990972-76991112) |
|
305-445, gnl|oryCun1|scaffold_165483 (6960-7246) |
|
305-445, gnl|panTro1|chr3 (89325399-89325096) |
|
305-445, gnl|rheMac2|chr5 (72768253-72767942) |
|
305-445, gnl|rn3|chr14 (33407119-33406828) |
