Non-Coding RNA Search

Pig2-99O07

Sequence:


               
               GTGGCCTCTATCTAATGTCTAGGCAGCAGGCTAATGACTCAGTGGGCCATGTGCAGCCAA
AATACAGCCAGCTATTCTGTGGCCTCCCTTCTCTGCACAGTGAGTCCTTGGTTGACACCT
TCTTGGATTCTCAAGGCCTCTCCATGAATGAGACAATGTCCAAGTCCCCCTTGAAGGATC
CTTTTCTCTTCAAGGAGCTCTCTCTCTTCCCTCTGCTACCTAAAACTCCACACCAGTCAG
CTCCGCTCTCTTCTCTGTCTTCCCAAAATTGGATTCTTCCATCTGATCATCAACAATCTC
AGATTAATGTCCCATTTCTGACTCTGGATGAGTGTGAAGCCTTGGAGTGGCATCTGCTGC
AGAGGCAGATCCAGCTTCAGTGGAACTTGCCAGGTGTTTTCCAGAGAGATCAGCGCACTC
AGAGCCCTGTGCAGTATAAGCCCTGTGACAAAGCCCAGTCTTCTGAGACTGTGAAAACTT
CCTGTCCAGGGCAGCCCAGCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGGCCTCTATCTAATGTCTAGGCAGCAGGCTAATGACTCAGTGGGCCATGTGCAGCCAA
AATACAGCCAGCTATTCTGTGGCCTCCCTTCTCTGCACAGTGAGTCCTTGGTTGACACCT
TCTTGGATTCTCAAGGCCTCTCCATGAATGAGACAATGTCCAAGTCCCCCTTGAAGGATC
CTTTTCTCTTCAAGGAGCTCTCTCTCTTCCCTCTGCTACCTAAAACTCCACACCAGTCAG
CTCCGCTCTCTTCTCTGTCTTCCCAAAATTGGATTCTTCCATCTGATCATCAACAATCTC
AGATTAATGTCCCATTTCTGACTCTGGATGAGTGTGAAGCCTTGGAGTGGCATCTGCTGC
AGAGGCAGATCCAGCTTCAGTGGAACTTGCCAGGTGTTTTCCAGAGAGATCAGCGCACTC
AGAGCCCTGTGCAGTATAAGCCCTGTGACAAAGCCCAGTCTTCTGAGACTGTGAAAACTT
CCTGTCCAGGGCAGCCCAGCTC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               121-240, - strand, RNAz p=0.919215

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               121-240, - strand, RNAz p=0.919215

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-495, gnl|bosTau2|chr8 (27627978-27627484)
               

               
               1-495, gnl|Hg17|chr9 (34825076-34824582)
               

               
               1-495, gnl|Mm7|chr4 (42864770-42864291)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-495, gnl|bosTau2|chr8 (27627978-27627484)
               

               
               1-495, gnl|Hg17|chr9 (34825076-34824582)
               

               
               1-495, gnl|Mm7|chr4 (42864770-42864291)

	1-495, gnl\|bosTau2\|chr8 (27627978-27627484)
	1-495, gnl\|Hg17\|chr9 (34825076-34824582)
	1-495, gnl\|Mm7\|chr4 (42864770-42864291)