Pig3-SRG8001C12
Sequence: | Distiller database | More info |
Sequence: | Distiller database | Help | Less info |
GGAACTTTGAAAAATGGGAATAGGAGGTCTGGACAAGGAATTTTCATATATTTTTCGACG AGCATTTGCTTCTCGAGTATTTCCCCCCGAGATTGTGGAGCAGATGGGTTGCAAACATGT TAAAGGCATCCTGTTATATGGGCCTCCAGGTTGTGGTAAGACGCTGTTGGCTCGACAGAT GTGGGGAGATGTTGAATGCAAGATAACCCAAAGTGGTCAATGGGCCAGAAATCCTCAACA AATATGTGGGAGAATCAGAGGCTAATATTCGTAAACTGTTTGCTGATGCTGAATATGAGC ATAGGAGGCTTGGTGCTAATAGTGGTTTGCACATCATCATCTTTGATGAAATTGATGCCA TCTGCAAGCATAGAGGGAGCATGGCTGGCAGCACGGGAGTTCATGATACCGTCGTCAACC AGTTGCTGTCCAAAATTGATGGGGTAGAGCAGCTGAACAACATCTTATTCATTGGAATGA CCAACAGACCATATCTGATAGACGATGCTCTCCTTCGACCTGAAAGACTGGAAGTTAAAA TGGAAATACGCTTACCAGATGAGAAAGGTCGACTACAGATCCTTCACATCCACACAGCAA GGATG |
Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
GGAACTTTGAAAAATGGGAATAGGAGGTCTGGACAAGGAATTTTCATATATTTTTCGACG AGCATTTGCTTCTCGAGTATTTCCCCCCGAGATTGTGGAGCAGATGGGTTGCAAACATGT TAAAGGCATCCTGTTATATGGGCCTCCAGGTTGTGGTAAGACGCTGTTGGCTCGACAGAT GTGGGGAGATGTTGAATGCAAGATAACCCAAAGTGGTCAATGGGCCAGAAATCCTCAACA AATATGTGGGAGAATCAGAGGCTAATATTCGTAAACTGTTTGCTGATGCTGAATATGAGC ATAGGAGGCTTGGTGCTAATAGTGGTTTGCACATCATCATCTTTGATGAAATTGATGCCA TCTGCAAGCATAGAGGGAGCATGGCTGGCAGCACGGGAGTTCATGATACCGTCGTCAACC AGTTGCTGTCCAAAATTGATGGGGTAGAGCAGCTGAACAACATCTTATTCATTGGAATGA CCAACAGACCATATCTGATAGACGATGCTCTCCTTCGACCTGAAAGACTGGAAGTTAAAA TGGAAATACGCTTACCAGATGAGAAAGGTCGACTACAGATCCTTCACATCCACACAGCAA GGATG |
Predicted RNA structure(s): 1 entry(ies) | More info |
Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
186-305, + strand, RNAz p=0.575843 |
Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
186-305, + strand, RNAz p=0.575843 |
Aligned organism(s): 33 entry(ies) | More info |
Aligned organism(s): 33 entry(ies) | Help | Less info |
107-321, gnl|bosTau2|chr19 (41230266-41230478) | |
107-321, gnl|canFam2|chr9 (13076396-13076645) | |
107-321, gnl|canFam2|chr9 (13076429-13076645) | |
107-321, gnl|danRer3|chr3 (30657296-30657544) | |
107-321, gnl|danRer3|chr3 (30657331-30657544) | |
107-321, gnl|dasNov1|scaffold_252044 (3348-3598) | |
107-321, gnl|dasNov1|scaffold_252044 (3382-3598) | |
107-321, gnl|fr1|chrUn (278018867-278018641) | |
107-321, gnl|fr1|chrUn (215735985-215736200) | |
107-321, gnl|galGal2|chr27 (1718134-1718377) | |
107-321, gnl|galGal2|chr27 (1718161-1718377) | |
107-321, gnl|hg17|chr17 (41889346-41889595) | |
107-321, gnl|hg17|chr17 (42106950-42107166) | |
107-321, gnl|Hg17|chr17 (42106958-42107170) | |
107-321, gnl|loxAfr1|scaffold_13337 (9972-10221) | |
107-321, gnl|loxAfr1|scaffold_13337 (10005-10221) | |
107-321, gnl|mm7|chr11 (103992028-103991778) | |
107-321, gnl|mm7|chr11 (103991993-103991778) | |
107-321, gnl|Mm7|chr11 (103991983-103991772) | |
107-321, gnl|monDom2|scaffold_18 (40126385-40126633) | |
107-321, gnl|monDom2|scaffold_18 (40126417-40126633) | |
107-321, gnl|oryCun1|scaffold_150483 (874-594) | |
107-321, gnl|oryCun1|scaffold_150483 (844-594) | |
107-321, gnl|panTro1|chr19 (63018940-63018691) | |
107-321, gnl|panTro1|chr19 (63018907-63018691) | |
107-321, gnl|rheMac2|chr16 (56152292-56152043) | |
107-321, gnl|rheMac2|chr16 (56152259-56152043) | |
107-321, gnl|rn3|chr10 (93045373-93045125) | |
107-321, gnl|rn3|chr10 (93045340-93045125) | |
107-321, gnl|tetNig1|chr2 (1273112-1272899) | |
107-321, gnl|tetNig1|chrUn_random (37141981-37141761) | |
107-321, gnl|xenTro1|scaffold_58 (811578-811810) | |
107-321, gnl|xenTro1|scaffold_58 (811596-811810) |
Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
107-321, gnl|bosTau2|chr19 (41230266-41230478) | |
107-321, gnl|canFam2|chr9 (13076396-13076645) | |
107-321, gnl|canFam2|chr9 (13076429-13076645) | |
107-321, gnl|danRer3|chr3 (30657296-30657544) | |
107-321, gnl|danRer3|chr3 (30657331-30657544) | |
107-321, gnl|dasNov1|scaffold_252044 (3348-3598) | |
107-321, gnl|dasNov1|scaffold_252044 (3382-3598) | |
107-321, gnl|fr1|chrUn (278018867-278018641) | |
107-321, gnl|fr1|chrUn (215735985-215736200) | |
107-321, gnl|galGal2|chr27 (1718134-1718377) | |
107-321, gnl|galGal2|chr27 (1718161-1718377) | |
107-321, gnl|hg17|chr17 (41889346-41889595) | |
107-321, gnl|hg17|chr17 (42106950-42107166) | |
107-321, gnl|Hg17|chr17 (42106958-42107170) | |
107-321, gnl|loxAfr1|scaffold_13337 (9972-10221) | |
107-321, gnl|loxAfr1|scaffold_13337 (10005-10221) | |
107-321, gnl|mm7|chr11 (103992028-103991778) | |
107-321, gnl|mm7|chr11 (103991993-103991778) | |
107-321, gnl|Mm7|chr11 (103991983-103991772) | |
107-321, gnl|monDom2|scaffold_18 (40126385-40126633) | |
107-321, gnl|monDom2|scaffold_18 (40126417-40126633) | |
107-321, gnl|oryCun1|scaffold_150483 (874-594) | |
107-321, gnl|oryCun1|scaffold_150483 (844-594) | |
107-321, gnl|panTro1|chr19 (63018940-63018691) | |
107-321, gnl|panTro1|chr19 (63018907-63018691) | |
107-321, gnl|rheMac2|chr16 (56152292-56152043) | |
107-321, gnl|rheMac2|chr16 (56152259-56152043) | |
107-321, gnl|rn3|chr10 (93045373-93045125) | |
107-321, gnl|rn3|chr10 (93045340-93045125) | |
107-321, gnl|tetNig1|chr2 (1273112-1272899) | |
107-321, gnl|tetNig1|chrUn_random (37141981-37141761) | |
107-321, gnl|xenTro1|scaffold_58 (811578-811810) | |
107-321, gnl|xenTro1|scaffold_58 (811596-811810) |