Non-Coding RNA Search

Pig3-SRG8001F12

Sequence:


               
               CTCTATCCCATTCTTTTTCTTTTTTTCTTTTCTTTAAAAAAAAACAAAACAAAACAAAAA
ACAAAACTAATCTAAAACAGAAACTAAAAAGAGAGAATGGGGCCAGTGACCTCAGATTGC
CCCTCTCTGCTCCATGCTGCCTCCCAACAGCTCCCAGCCTGAATTCCGTCTGTCCGGCTG
GGGGCCATCTGAGTGTCCACCCACATTCTGCTGCCACCAGTCACCAAAGCCCCCTCCCAG
TGGGGGGTGGAGGGGATCCTCGGGGCCTGCAATTTGGCCCCAAACCAGAGAATGTACCTT
GAAGGGGAGGGCTAGTTNGGGGGGCTTCCCCATCCTTAAGAGACCCTCTCAGCCCAGTGA
CCCCCCCCCCAACCCCAAGTCTCCAGGCAGGAACCCTCCATTGTATCTGTCCCCACACCG
CCACCTCACACAGTGTGACGTCTCCAGGGAGGTGGAGGTGGGGGAATCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCTATCCCATTCTTTTTCTTTTTTTCTTTTCTTTAAAAAAAAACAAAACAAAACAAAAA
ACAAAACTAATCTAAAACAGAAACTAAAAAGAGAGAATGGGGCCAGTGACCTCAGATTGC
CCCTCTCTGCTCCATGCTGCCTCCCAACAGCTCCCAGCCTGAATTCCGTCTGTCCGGCTG
GGGGCCATCTGAGTGTCCACCCACATTCTGCTGCCACCAGTCACCAAAGCCCCCTCCCAG
TGGGGGGTGGAGGGGATCCTCGGGGCCTGCAATTTGGCCCCAAACCAGAGAATGTACCTT
GAAGGGGAGGGCTAGTTNGGGGGGCTTCCCCATCCTTAAGAGACCCTCTCAGCCCAGTGA
CCCCCCCCCCAACCCCAAGTCTCCAGGCAGGAACCCTCCATTGTATCTGTCCCCACACCG
CCACCTCACACAGTGTGACGTCTCCAGGGAGGTGGAGGTGGGGGAATCTCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               237-429, - strand, RNAz p=0.888991

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               237-429, - strand, RNAz p=0.888991

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               60-465, gnl|bosTau2|chr5 (23047791-23047387)
               

               
               60-465, gnl|Hg17|chr12 (48761891-48762281)
               

               
               60-465, gnl|Mm7|chr15 (99684569-99684973)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               60-465, gnl|bosTau2|chr5 (23047791-23047387)
               

               
               60-465, gnl|Hg17|chr12 (48761891-48762281)
               

               
               60-465, gnl|Mm7|chr15 (99684569-99684973)

	60-465, gnl\|bosTau2\|chr5 (23047791-23047387)
	60-465, gnl\|Hg17\|chr12 (48761891-48762281)
	60-465, gnl\|Mm7\|chr15 (99684569-99684973)