Non-Coding RNA Search

Pig3-SRG8001K17

Sequence:


               
               AGCGTATAATTCTCTTGTAGCATCTGACATGTTATACTTACCTGCTAAACAAGCTTCCAG
ATGGGGTATTGTGTTCTTCATCTATGTGTTCCACTGCCTGTCATAGAATCTGGAATATAA
GAAGTTATTCAGTATAATGTCTGTTAAATGAACAGATGAATCCATTTTTTGTATACACAT
ATATCAGAGGCATGCATAAACATCTTTGTATGTATTAATATTATGCAAACTGGTGCAAGA
CAAATTATGCTATTAAAGGCAATGATTATTCCTTTTATAAGATAATAACTGTAAAAATAT
AATTGATAATTTATTTGAATGTTTATACTGTAAAAGGCCTAGTAATGCCAGTTTCCATGT
GTTTAGCATGGGTTATTTAATTGAATCCTTACCCTAATTCTATAAAGCATATACATGCTT
TGTTTTAAGGTCAAATTGAAAATGACCATAAGTGATGAACCTTTTTTACTTTAAGTGTGT
ATAAGTTTATTCCGTTACTATTACTAATTAAAAACAGCCCCAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCGTATAATTCTCTTGTAGCATCTGACATGTTATACTTACCTGCTAAACAAGCTTCCAG
ATGGGGTATTGTGTTCTTCATCTATGTGTTCCACTGCCTGTCATAGAATCTGGAATATAA
GAAGTTATTCAGTATAATGTCTGTTAAATGAACAGATGAATCCATTTTTTGTATACACAT
ATATCAGAGGCATGCATAAACATCTTTGTATGTATTAATATTATGCAAACTGGTGCAAGA
CAAATTATGCTATTAAAGGCAATGATTATTCCTTTTATAAGATAATAACTGTAAAAATAT
AATTGATAATTTATTTGAATGTTTATACTGTAAAAGGCCTAGTAATGCCAGTTTCCATGT
GTTTAGCATGGGTTATTTAATTGAATCCTTACCCTAATTCTATAAAGCATATACATGCTT
TGTTTTAAGGTCAAATTGAAAATGACCATAAGTGATGAACCTTTTTTACTTTAAGTGTGT
ATAAGTTTATTCCGTTACTATTACTAATTAAAAACAGCCCCAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               327-445, - strand, RNAz p=0.52734

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               327-445, - strand, RNAz p=0.52734

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               34-445, gnl|bosTau2|chr5 (53365499-53365911)
               

               
               34-445, gnl|Hg17|chr12 (24088491-24088111)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               34-445, gnl|bosTau2|chr5 (53365499-53365911)
               

               
               34-445, gnl|Hg17|chr12 (24088491-24088111)

	34-445, gnl\|bosTau2\|chr5 (53365499-53365911)
	34-445, gnl\|Hg17\|chr12 (24088491-24088111)