Non-Coding RNA Search

Pig3-SRG8003L18

Sequence:


               
               AGAATGGGAAGATGAAGAAGGAATGAATAGAATGCTACCCATGAGAGAACGGTCCAAAAC
AGAGGAAGACATTCTCCGGGCAGCACTTAAGTACAGCAGCAAGAAGACTGGAAGTAATCT
TACGTCAGCCTCTGATGATTCCAATGGGCTGGAGTGGGAAAATGACTTTGTTAGTGCCGA
AATGGATGATAATGGCAATTCCGAGTATTCGGGATTTGTAAATCCTGTGTTAGAACTGTC
TGATTCTGGCTTAAAGCAATATGACACAGATCAACAAAAACGATAGGGTAAAATTGTACG
AACTTGTTTATCAGTTATCACCAAATGTTAAAAACCAACTAGAATGTATAAATAGTTGTG
CTGAGCCTTTTTGTAAGGGGGGAGGTAAGAAACCGTGTTGTAAATGCTTCTTAGAAAGGA
ATAGAAATGATAGGCTGTATCTGAATTGCTTCAGAATTAAGTGCAATTTCATCATCTGCC
TTCTGCTTTTCAAAAACAATGTTTCTGTCATGTTATTACACTCTTTTCTTTATAGCACTA
TTTACTATTTGTAGATTTTCACTTTTTAAAATAGTTTTATTTCACTTTGAATGCTTTCTT
AGCCCTCTTTCAGTAGCTGTGGAAATACCAAGGCATTTTGTGTTACTTCTCAGCAGATGT
GAAGGGAGCATGAAGAAGGACTGCCAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAATGGGAAGATGAAGAAGGAATGAATAGAATGCTACCCATGAGAGAACGGTCCAAAAC
AGAGGAAGACATTCTCCGGGCAGCACTTAAGTACAGCAGCAAGAAGACTGGAAGTAATCT
TACGTCAGCCTCTGATGATTCCAATGGGCTGGAGTGGGAAAATGACTTTGTTAGTGCCGA
AATGGATGATAATGGCAATTCCGAGTATTCGGGATTTGTAAATCCTGTGTTAGAACTGTC
TGATTCTGGCTTAAAGCAATATGACACAGATCAACAAAAACGATAGGGTAAAATTGTACG
AACTTGTTTATCAGTTATCACCAAATGTTAAAAACCAACTAGAATGTATAAATAGTTGTG
CTGAGCCTTTTTGTAAGGGGGGAGGTAAGAAACCGTGTTGTAAATGCTTCTTAGAAAGGA
ATAGAAATGATAGGCTGTATCTGAATTGCTTCAGAATTAAGTGCAATTTCATCATCTGCC
TTCTGCTTTTCAAAAACAATGTTTCTGTCATGTTATTACACTCTTTTCTTTATAGCACTA
TTTACTATTTGTAGATTTTCACTTTTTAAAATAGTTTTATTTCACTTTGAATGCTTTCTT
AGCCCTCTTTCAGTAGCTGTGGAAATACCAAGGCATTTTGTGTTACTTCTCAGCAGATGT
GAAGGGAGCATGAAGAAGGACTGCCAAAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|22122401|ref|NP_666076.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|22122401|ref|NP_666076.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               19-177, + strand, RNAz p=0.870772

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               19-177, + strand, RNAz p=0.870772

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               19-686, gnl|bosTau2|chr6 (4663898-4664585)
               

               
               19-686, gnl|Hg17|chr4 (113546902-113547595)
               

               
               19-686, gnl|Mm7|chr3 (127647633-127647008)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               19-686, gnl|bosTau2|chr6 (4663898-4664585)
               

               
               19-686, gnl|Hg17|chr4 (113546902-113547595)
               

               
               19-686, gnl|Mm7|chr3 (127647633-127647008)

	19-686, gnl\|bosTau2\|chr6 (4663898-4664585)
	19-686, gnl\|Hg17\|chr4 (113546902-113547595)
	19-686, gnl\|Mm7\|chr3 (127647633-127647008)